Basic Information
Locus ID:
nbisL1-mrna-2439
Species & Taxonomic ID:
Hibiscus hamabo Siebold & Zucc. & 1841
Short Name:
PRK1
Description:
LRR receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 20726973 | 20730220 | + | nbisL1-mrna-2439 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.96 | 70,090.23 Da | 39.33 | 93.49 | -0.22 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 25 | 65 | 2.7E-6 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 118 | 177 | 5.8E-10 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 350 | 624 | 1.6E-31 | IPR000719 |
| SUPERFAMILY | SSF52058 | L domain-like | 50 | 210 | 3.4E-32 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 350 | 630 | 8.59E-52 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 423 | 636 | 1.2E-37 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 186 | 246 | 2.1E-5 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 25 | 185 | 5.3E-37 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 328 | 422 | 1.5E-16 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 347 | 629 | 28.866587 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 246 | 268 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 246 | 271 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G35390.1 | Leucine-rich repeat protein kinase family protein. Encodes a member of the receptor-like kinase family of genes. In pollen tubes, it accumulates in the plasma membrane of the apical growing tip through the process of exocytosis. | 0 |
| RefSeq | XP_012473059.1 | pollen receptor-like kinase 2 [Gossypium raimondii] | 0 |
| C0LGU0 | Pollen receptor-like kinase 1 OS=Arabidopsis thaliana OX=3702 GN=PRK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6A2XVI1 | Protein kinase domain-containing protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00116954pilonHSYRG00107 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology