Basic Information
Locus ID:
nbisL1-mrna-24257
Species & Taxonomic ID:
Carallia pectinifolia & 98586
Genome Assembly:
GCA_037832335.1
Description:
Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr10 | 21870522 | 21881284 | - | nbisL1-mrna-24257 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.14 | 154,138.16 Da | 49.83 | 84.44 | -0.55 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00225 | Kinesin motor domain | 102 | 432 | 1.9E-109 | IPR001752 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 96 | 468 | 1.95E-119 | IPR027417 |
| Gene3D | G3DSA:3.40.850.10 | Kinesin motor domain | 90 | 445 | 2.8E-137 | IPR036961 |
| SMART | SM00129 | kinesin_4 | 94 | 441 | 2.3E-157 | IPR001752 |
| ProSiteProfiles | PS50067 | Kinesin motor domain profile. | 96 | 433 | 117.965897 | IPR001752 |
| ProSitePatterns | PS00411 | Kinesin motor domain signature. | 329 | 340 | - | IPR019821 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 330 | 348 | 3.9E-41 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 297 | 314 | 3.9E-41 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 383 | 404 | 3.9E-41 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 168 | 189 | 3.9E-41 | IPR001752 |
| Coils | Coil | Coil | 1033 | 1067 | - | - |
| Coils | Coil | Coil | 577 | 604 | - | - |
| Coils | Coil | Coil | 1302 | 1322 | - | - |
| Coils | Coil | Coil | 614 | 634 | - | - |
| Coils | Coil | Coil | 1253 | 1273 | - | - |
| Coils | Coil | Coil | 1127 | 1151 | - | - |
| Coils | Coil | Coil | 531 | 551 | - | - |
| Coils | Coil | Coil | 863 | 897 | - | - |
| Coils | Coil | Coil | 1197 | 1245 | - | - |
| Coils | Coil | Coil | 765 | 826 | - | - |
| Coils | Coil | Coil | 447 | 474 | - | - |
| Coils | Coil | Coil | 693 | 727 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G44050.1 | P-loop containing nucleoside triphosphate hydrolases superfamily protein. | 0 |
| RefSeq | XP_021690187.1 | kinesin-like protein KIN-12E [Hevea brasiliensis] | 0 |
| F4J1U4 | Kinesin-like protein KIN-12E OS=Arabidopsis thaliana OX=3702 GN=KIN12E PE=3 SV=1 | 0 | |
| TrEMBL | B9SS38 | Kinesin, putative OS=Ricinus communis OX=3988 GN=RCOM_0395650 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology