Basic Information
Locus ID:
nbisL1-mrna-24214
Species & Taxonomic ID:
Rhizophora mangle & 40031
Genome Assembly:
GCA_037832345.1
Description:
leucine-rich repeat protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 002097F_pilon | 43065 | 44270 | + | nbisL1-mrna-24214 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.17 | 19,851.62 Da | 30.02 | 100.17 | 0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 25 | 174 | 1.5E-15 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 13 | 77 | 2.7E-6 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 83 | 178 | 2.3E-9 | - |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 43 | 65 | - | IPR017441 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G51830.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_021691107.1 | - | 0 |
| O64483 | Senescence-induced receptor-like serine/threonine-protein kinase OS=Arabidopsis thaliana OX=3702 GN=SIRK PE=1 SV=1 | 0 | |
| TrEMBL | A0A6A6LKN4 | - | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Eleusine coracana subsp. coracana | 1 | gene-QOZ80_6AG0532990 |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_057047 |
| Poaceae | Oryza coarctata | 1 | Oco21G010000 |
| Poaceae | Oryza sativa | 2 | LOC_Os09g17890.1, LOC_Os09g22300.1 |
| Poaceae | Thinopyrum elongatum | 1 | Tel1E01G552100 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-13861 |
| Posidoniaceae | Posidonia oceanica | 2 | gene.Posoc05g10600, gene.Posoc08g12640 |
| Rhizophoraceae | Rhizophora mangle | 6 | nbisL1-mrna-21362, nbisL1-mrna-24214, nbisL1-mrna-24215 ... |
| Zosteraceae | Zostera marina | 1 | Zosma02g14880.v3.1 |