Basic Information
Locus ID:
nbisL1-mrna-2421
Species & Taxonomic ID:
Rhizophora mangle & 40031
Genome Assembly:
GCA_037832345.1
Description:
RING-like zinc finger
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 001711F_pilon | 5891573 | 5892566 | + | nbisL1-mrna-2421 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.89 | 23,440.21 Da | 66.56 | 84.55 | -0.21 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Coils | Coil | Coil | 68 | 88 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_3_RagTag.104 |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-258 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-14319 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-5898 |
| Rhizophoraceae | Kandelia candel | 1 | add.evm.TU.utg000019l.484 |
| Rhizophoraceae | Kandelia obovata | 1 | Maker00006795 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-19390 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-2421 |
| Salicaceae | Populus euphratica | 2 | populus_peu14130, populus_peu23263 |