Basic Information
Locus ID:
nbisL1-mrna-2418
Species & Taxonomic ID:
Carallia pectinifolia & 98586
Genome Assembly:
GCA_037832335.1
Description:
(NAC) domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr01 | 22632867 | 22635768 | + | nbisL1-mrna-2418 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.32 | 44,635.66 Da | 41.32 | 59.12 | -0.89 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02365 | No apical meristem (NAM) protein | 63 | 204 | 9.1E-20 | IPR003441 |
| SUPERFAMILY | SSF101941 | NAC domain | 47 | 223 | 1.44E-34 | IPR036093 |
| Gene3D | G3DSA:2.170.150.80 | NAC domain | 71 | 228 | 5.1E-28 | IPR036093 |
| ProSiteProfiles | PS51005 | NAC domain profile. | 62 | 223 | 29.138895 | IPR003441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 226 | 240 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 275 | 297 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 226 | 262 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 139 | 162 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 146 | 162 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G01600.1 | NAC domain containing protein 44. | 0 |
| RefSeq | XP_015576184.1 | SUPPRESSOR OF GAMMA RESPONSE 1 isoform X2 [Ricinus communis] | 0 |
| Q6NQK2 | SUPPRESSOR OF GAMMA RESPONSE 1 OS=Arabidopsis thaliana OX=3702 GN=SOG1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2N9I3N0 | NAC domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS48539 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology