Basic Information
Locus ID:
nbisL1-mrna-2417
Species & Taxonomic ID:
Carallia pectinifolia & 98586
Genome Assembly:
GCA_037832335.1
Description:
Belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr01 | 22627236 | 22630285 | + | nbisL1-mrna-2417 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.51 | 32,216.89 Da | 56.54 | 87.61 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 20 | 218 | 1.2E-42 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 20 | 247 | 1.62E-56 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 15 | 228 | 2.7E-55 | - |
| SMART | SM00220 | serkin_6 | 10 | 222 | 1.7E-21 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 222 | 33.149189 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 78 | 90 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 72 | 90 | 5.0E-10 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 146 | 168 | 5.0E-10 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 189 | 211 | 5.0E-10 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 34 | 47 | 5.0E-10 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 246 | 268 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G50180.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_021595395.1 | serine/threonine-protein kinase STY13 [Manihot esculenta] | 0 |
| Q9ZQ31 | Serine/threonine-protein kinase STY13 OS=Arabidopsis thaliana OX=3702 GN=STY13 PE=1 SV=2 | 0 | |
| TrEMBL | A0A2P2KHB8 | Uncharacterized protein MANES_15G151400 OS=Rhizophora mucronata OX=61149 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology