Basic Information
Locus ID:
nbisL1-mrna-24118
Species & Taxonomic ID:
Rhizophora mangle & 40031
Genome Assembly:
GCA_037832345.1
Description:
Receptor-like cytosolic serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 000087F_pilon | 25289 | 25783 | + | nbisL1-mrna-24118 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 10.02 | 16,077.13 Da | 54.63 | 72.62 | -0.55 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 54 | 138 | 3.8E-10 | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_034927538.1 | - | 0 |
| TrEMBL | A0A4U5Q5R0 | Serine/threonine-protein kinase CDG1-like isoform X1 OS=Populus alba OX=43335 GN=D5086_0000136510 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 2 | jg28913, jg846 |
| Apiaceae | Apium graveolens | 1 | Ag9G00835 |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-5154 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-10971 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-9315 |
| Rhizophoraceae | Kandelia candel | 1 | evm.TU.utg000009l.1208 |
| Rhizophoraceae | Kandelia obovata | 1 | Maker00005547 |
| Rhizophoraceae | Rhizophora mangle | 2 | nbisL1-mrna-24118, nbisL1-mrna-24119 |
| Salicaceae | Populus euphratica | 2 | populus_peu08649, populus_peu36701 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132599368 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107012481 |
| Tamaricaceae | Reaumuria soongarica | 1 | gene_7940 |
| Tamaricaceae | Tamarix chinensis | 1 | TC10G0196 |