Basic Information
Locus ID:
nbisL1-mrna-24109
Species & Taxonomic ID:
Rhizophora mangle & 40031
Genome Assembly:
GCA_037832345.1
Description:
LRR receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 001795F_pilon | 187551 | 188322 | + | nbisL1-mrna-24109 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.82 | 13,498.38 Da | 41.27 | 102.76 | 0.22 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 1 | 44 | 1.1E-6 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 1 | 83 | 2.63E-14 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1 | 105 | 3.3E-13 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 127 | 11.425232 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G45800.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_034918507.1 | calmodulin-binding receptor kinase CaMRLK-like [Populus alba] | 0 |
| Q9FK63 | Calmodulin-binding receptor kinase CaMRLK OS=Arabidopsis thaliana OX=3702 GN=CAMRLK PE=1 SV=1 | 0 | |
| TrEMBL | A0A2P2KGF2 | Leucine-rich repeat transmembrane protein kinase OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_01.1580.V1.1 |
| Rhizophoraceae | Rhizophora apiculata | 4 | nbisL1-mrna-20650, nbisL1-mrna-22115, nbisL1-mrna-22343 ... |
| Rhizophoraceae | Rhizophora mangle | 4 | nbisL1-mrna-23547, nbisL1-mrna-23650, nbisL1-mrna-24109 ... |