Basic Information
Locus ID:
nbisL1-mrna-2409
Species & Taxonomic ID:
Carallia pectinifolia & 98586
Genome Assembly:
GCA_037832335.1
Description:
Protein kinase PVPK-1-like
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr01 | 22572548 | 22576771 | + | nbisL1-mrna-2409 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.37 | 64,217.17 Da | 48.17 | 79.45 | -0.30 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05574 | STKc_phototropin_like | 195 | 543 | 0.0 | - |
| Pfam | PF00069 | Protein kinase domain | 198 | 347 | 1.6E-37 | IPR000719 |
| Pfam | PF00069 | Protein kinase domain | 420 | 523 | 1.2E-19 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 178 | 551 | 1.35E-82 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 418 | 541 | 5.8E-35 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 195 | 280 | 1.7E-54 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 281 | 347 | 1.7E-54 | - |
| SMART | SM00220 | serkin_6 | 197 | 523 | 2.5E-91 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 197 | 523 | 45.247894 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 318 | 330 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 386 | 406 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G27580.1 | Protein kinase superfamily protein. a member of a subfamily of Ser/Thr PKs in plants. | 0 |
| RefSeq | XP_024442641.1 | protein kinase PVPK-1 [Populus trichocarpa] | 0 |
| P15792 | Protein kinase PVPK-1 OS=Phaseolus vulgaris OX=3885 PE=2 SV=1 | 0 | |
| TrEMBL | A0A2P2ITM8 | Protein kinase PVPK-1 OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology