Basic Information
Locus ID:
nbisL1-mrna-24089
Species & Taxonomic ID:
Rhizophora mangle & 40031
Genome Assembly:
GCA_037832345.1
Description:
LRR receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 002487F_pilon | 150800 | 158743 | + | nbisL1-mrna-24089 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.54 | 31,080.42 Da | 41.78 | 89.02 | -0.28 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01397 | Terpene synthase, N-terminal domain | 2 | 65 | 3.6E-16 | IPR001906 |
| SUPERFAMILY | SSF48239 | Terpenoid cyclases/Protein prenyltransferases | 1 | 83 | 1.88E-25 | IPR008930 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 146 | 267 | 1.13E-12 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 136 | 224 | 2.3E-10 | - |
| Gene3D | G3DSA:1.50.10.130 | - | 1 | 91 | 8.2E-28 | IPR036965 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G45800.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_011039421.1 | PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At2g24230 [Populus euphratica] | 0 |
| Q9FK63 | Calmodulin-binding receptor kinase CaMRLK OS=Arabidopsis thaliana OX=3702 GN=CAMRLK PE=1 SV=1 | 0 | |
| TrEMBL | A0A2P2KGF2 | Leucine-rich repeat transmembrane protein kinase OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Casuarinaceae | Casuarina glauca | 1 | Cgl04G2449 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-12345 |
| Rhizophoraceae | Rhizophora mangle | 6 | nbisL1-mrna-22134, nbisL1-mrna-22135, nbisL1-mrna-22804 ... |