Basic Information
Locus ID:
nbisL1-mrna-24034
Species & Taxonomic ID:
Carallia pectinifolia & 98586
Genome Assembly:
GCA_037832335.1
Description:
LRR receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr10 | 19291049 | 19297086 | + | nbisL1-mrna-24034 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.62 | 78,781.92 Da | 44.98 | 91.11 | -0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 98 | 157 | 2.4E-9 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 430 | 682 | 2.4E-21 | IPR001245 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 31 | 70 | 2.5E-11 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 35 | 217 | 4.93E-33 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 429 | 682 | 4.25E-37 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 500 | 694 | 1.2E-29 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 29 | 227 | 4.7E-42 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 391 | 499 | 2.2E-15 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 417 | 686 | 16.838554 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 317 | 346 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G45840.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_024437431.1 | protein MALE DISCOVERER 2 isoform X1 [Populus trichocarpa] | 0 |
| C0LGQ4 | Protein MALE DISCOVERER 2 OS=Arabidopsis thaliana OX=3702 GN=MDIS2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3N7FR10 | Protein kinase domain-containing protein OS=Populus trichocarpa OX=3694 GN=POPTR_011G067400 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology