Basic Information
Locus ID:
nbisL1-mrna-23920
Species & Taxonomic ID:
Rhizophora mangle & 40031
Genome Assembly:
GCA_037832345.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 002213F_pilon | 312604 | 321395 | - | nbisL1-mrna-23920 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.97 | 62,351.27 Da | 44.05 | 83.92 | -0.33 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 362 | 527 | 1.2E-23 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 337 | 512 | 9.84E-42 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 62 | 117 | 9.18E-10 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 30 | 126 | 3.4E-12 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 434 | 565 | 4.8E-16 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 329 | 433 | 1.1E-28 | - |
| SMART | SM00220 | serkin_6 | 358 | 538 | 4.7E-4 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 358 | 569 | 24.527449 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 364 | 387 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 217 | 251 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 217 | 240 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 147 | 172 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G20850.1 | STRUBBELIG-receptor family 1. | 0 |
| RefSeq | XP_021688642.1 | protein STRUBBELIG-RECEPTOR FAMILY 3-like isoform X2 [Hevea brasiliensis] | 0 |
| Q06BH3 | Protein STRUBBELIG-RECEPTOR FAMILY 1 OS=Arabidopsis thaliana OX=3702 GN=SRF1 PE=1 SV=2 | 0 | |
| TrEMBL | A0A067JDS1 | Protein kinase domain-containing protein OS=Jatropha curcas OX=180498 GN=JCGZ_21384 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology