Basic Information
Locus ID:
nbisL1-mrna-23709
Species & Taxonomic ID:
Carallia pectinifolia & 98586
Genome Assembly:
GCA_037832335.1
Short Name:
NIK2
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr10 | 14565624 | 14569040 | + | nbisL1-mrna-23709 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.74 | 69,075.15 Da | 37.52 | 94.23 | -0.17 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 32 | 70 | 2.0E-10 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 302 | 568 | 1.5E-43 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 122 | 181 | 1.7E-8 | IPR001611 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 278 | 571 | 4.37E-74 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 33 | 228 | 8.25E-33 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 31 | 210 | 1.9E-51 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 378 | 590 | 1.3E-60 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 270 | 377 | 3.3E-37 | - |
| SMART | SM00220 | serkin_6 | 301 | 570 | 2.4E-34 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 301 | 556 | 34.972477 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 420 | 432 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 307 | 329 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G25560.1 | NSP-interacting kinase 2. | 0 |
| RefSeq | XP_021674786.1 | protein NSP-INTERACTING KINASE 2-like [Hevea brasiliensis] | 0 |
| Q8RY65 | Protein NSP-INTERACTING KINASE 2 OS=Arabidopsis thaliana OX=3702 GN=NIK2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8T2Y7C9 | Protein kinase domain-containing protein OS=Populus deltoides OX=3696 GN=H0E87_015929 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology