Basic Information
Locus ID:
nbisL1-mrna-23668
Species & Taxonomic ID:
Carallia pectinifolia & 98586
Genome Assembly:
GCA_037832335.1
Description:
Serine threonine-protein kinase STN7
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr10 | 14149270 | 14154042 | + | nbisL1-mrna-23668 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.46 | 64,669.02 Da | 39.08 | 88.18 | -0.20 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14013 | STKc_SNT7_plant | 149 | 465 | 0.0 | - |
| Pfam | PF00069 | Protein kinase domain | 146 | 465 | 9.2E-22 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 139 | 469 | 5.53E-35 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 255 | 469 | 6.7E-50 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 132 | 226 | 5.8E-10 | - |
| SMART | SM00220 | serkin_6 | 145 | 465 | 1.3E-12 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 145 | 465 | 25.813644 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 151 | 179 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 287 | 299 | - | IPR008271 |
| Coils | Coil | Coil | 574 | 576 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G68830.1 | STT7 homolog STN7. STN7 protein kinase; required for state transitions, phosphorylation of the major antenna complex (LHCII) between PSII and PSI, and light adaptation | 0 |
| RefSeq | XP_012082027.1 | serine/threonine-protein kinase STN7, chloroplastic [Jatropha curcas] | 0 |
| Q9S713 | Serine/threonine-protein kinase STN7, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=STN7 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2P2KW26 | Protein kinase domain-containing protein OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 1 | jg9186 |
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_18381 |
| Amaranthaceae | Atriplex hortensis | 1 | Ah025938 |
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg12744, Sbi_jg53153 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg8732 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00018921 |
| Amaranthaceae | Suaeda glauca | 3 | Sgl34126, Sgl34358, Sgl39759 |
| Amaranthaceae | Chenopodium album | 5 | gene:ENSEOMG00000001590, gene:ENSEOMG00000001784 ... |
| Amaranthaceae | Chenopodium quinoa | 2 | CQ.Regalona.r1.6AG0015170, CQ.Regalona.r1.6BG0016010 |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30225740 |
| Apiaceae | Apium graveolens | 1 | Ag8G02042 |
| Arecaceae | Cocos nucifera | 1 | COCNU_06G008190 |
| Arecaceae | Phoenix dactylifera | 1 | gene-LOC103697640 |
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_05.2786.V1.1 |
| Asteraceae | Flaveria trinervia | 1 | Ftri8G26913 |
| Brassicaceae | Arabidopsis thaliana | 1 | AT1G68830.1 |
| Brassicaceae | Eutrema salsugineum | 1 | Thhalv10018353m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 1 | Sp5g23940.v2.2 |
| Brassicaceae | Brassica nigra | 1 | BniB03g046200.2N |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq03G2033 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl03G2172 |
| Cymodoceaceae | Cymodocea nodosa | 1 | gene.Cymno11g00020 |
| Dunaliellaceae | Dunaliella salina | 2 | Dusal.0857s00002.v1.0, Dusal.0859s00003.v1.0 |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate03g02620 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG03.502 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00019334 |
| Plumbaginaceae | Limonium bicolor | 2 | Lb6G30218, Lb6G30321 |
| Poaceae | Echinochloa crus-galli | 3 | AH05.1536, BH05.1683, CH05.1904 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_5AG0364440, gene-QOZ80_5BG0412460 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.1HG0079140.1 |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_015579 |
| Poaceae | Oryza coarctata | 1 | Oco09G015930 |
| Poaceae | Oryza sativa | 1 | LOC_Os05g47560.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_09G223000 |
| Poaceae | Puccinellia tenuiflora | 2 | Pt_Chr0503742, Pt_Chr0503812 |
| Poaceae | Sporobolus alterniflorus | 3 | Chr01G015080, Chr12G021790, Chr22G002250 |
| Poaceae | Thinopyrum elongatum | 1 | Tel1E01G602100 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC1AG054320, gene_TRIDC1BG062180 |
| Poaceae | Triticum aestivum | 3 | TraesCS1A02G369800.1, TraesCS1B02G388900.1 ... |
| Poaceae | Zea mays | 1 | Zm00001eb294720_P001 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-24963 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g28727 |
| Portulacaceae | Portulaca oleracea | 2 | evm.TU.LG13.621, evm.TU.LG21.311 |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc04g00070 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_17_RagTag.941 |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-23668 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-3101 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-21926 |
| Rhizophoraceae | Kandelia candel | 1 | evm.TU.utg000013l.527 |
| Rhizophoraceae | Kandelia obovata | 1 | Maker00004481 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-10920 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-23121 |
| Salicaceae | Populus euphratica | 4 | populus_peu07026, populus_peu20984, populus_peu20985 ... |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132645142 |
| Solanaceae | Solanum chilense | 1 | SOLCI007315900 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107007041 |
| Tamaricaceae | Reaumuria soongarica | 1 | gene_10238 |
| Tamaricaceae | Tamarix chinensis | 1 | TC04G0245 |
| Zosteraceae | Zostera marina | 1 | Zosma03g03790.v3.1 |