Basic Information
Locus ID:
nbisL1-mrna-23653
Species & Taxonomic ID:
Rhizophora mangle & 40031
Genome Assembly:
GCA_037832345.1
Description:
Receptor protein kinase-like protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 001786F_pilon | 307734 | 309282 | + | nbisL1-mrna-23653 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.31 | 24,704.23 Da | 32.28 | 101.88 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 155 | 222 | 7.4E-12 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 2 | 132 | 7.48E-19 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 154 | 224 | 1.0E-13 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1 | 144 | 9.0E-31 | IPR032675 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 74 | 96 | 7.673451 | IPR001611 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 168 | 224 | 10.266244 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 174 | 196 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G11520.1 | calmodulin-binding receptor-like cytoplasmic kinase 3. high overall homology to CRCK1 | 0 |
| RefSeq | XP_024459160.1 | - | 0 |
| Q8RZV7 | Leucine-rich repeat receptor protein kinase MSP1 OS=Oryza sativa subsp. japonica OX=39947 GN=MSP1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2P2MEA4 | Receptor protein kinase OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Chenopodium album | 1 | gene:ENSEOMG00000000422 |
| Arecaceae | Cocos nucifera | 2 | COCNU_06G010780, scaffold045056G000070 |
| Asteraceae | Flaveria trinervia | 1 | Ftri18G01662 |
| Brassicaceae | Arabidopsis thaliana | 1 | AT1G61475.1 |
| Poaceae | Sporobolus alterniflorus | 1 | Chr26G016310 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-5941 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-23653 |