halophFGD

Basic Information

Locus ID: nbisL1-mrna-2363

Species & Taxonomic ID: Ceriops zippeliana & 413951

Genome Assembly: GCA_037897445.1

Description: DnaJ molecular chaperone homology domain

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
000060F_pilon	2535564	2536277	-	nbisL1-mrna-2363

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
5.56	26,050.74 Da	32.73	54.98	-0.69

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
MobiDBLite	mobidb-lite	consensus disorder prediction	119	138	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	212	227	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	209	237	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	118	138	-	-

Best hit

Source	Best Hit ID	Description	E-value
RefSeq	XP_021639176.1	uncharacterized protein LOC110634472 [Hevea brasiliensis]	0
TrEMBL	A0A067K0N2	DUF3444 domain-containing protein OS=Jatropha curcas OX=180498 GN=JCGZ_18691 PE=4 SV=1	0

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

No network data available for this species.

Orthology

Family	Species	Count	Orthologous Genes
Acanthaceae	Avicennia marina	5	jg10785, jg1241, jg26355, jg28521, jg30157
Aizoaceae	Mesembryanthemum crystallinum	3	gene_1487, gene_24169, gene_26325
Amaranthaceae	Atriplex hortensis	3	Ah009359, Ah023699, Ah027185
Amaranthaceae	Beta vulgaris	3	BVRB_1g007700, BVRB_6g133630, BVRB_9g221560
Amaranthaceae	Salicornia bigelovii	6	Sbi_jg10824, Sbi_jg12559, Sbi_jg4179, Sbi_jg47492 ... Sbi_jg49623, Sbi_jg53377
Amaranthaceae	Salicornia europaea	3	Seu_jg21723, Seu_jg5626, Seu_jg8551
Amaranthaceae	Suaeda aralocaspica	3	GOSA_00001033, GOSA_00010461, GOSA_00018734
Amaranthaceae	Suaeda glauca	6	Sgl10585, Sgl15836, Sgl33698, Sgl39009, Sgl55635, Sgl61363
Amaranthaceae	Chenopodium album	9	gene:ENSEOMG00000001550, gene:ENSEOMG00000003449 ... gene:ENSEOMG00000014309, gene:ENSEOMG00000018380, gene:ENSEOMG00000026496, gene:ENSEOMG00000033084, gene:ENSEOMG00000036690, gene:ENSEOMG00000047684, gene:ENSEOMG00000052878
Amaranthaceae	Chenopodium quinoa	4	CQ.Regalona.r1.1AG0010550, CQ.Regalona.r1.1BG0015310 ... CQ.Regalona.r1.7BG0001440, CQ.Regalona.r1.9AG0022990
Anacardiaceae	Pistacia vera	1	pistato.v30102670
Apiaceae	Apium graveolens	9	Ag10G02856, Ag1G00309, Ag1G00677, Ag2G00495, Ag3G00071 ... Ag3G00281, Ag4G02511, Ag6G02916, Ag8G00938
Arecaceae	Cocos nucifera	3	COCNU_03G007530, scaffold004000G000010 ... scaffold008606G000010
Arecaceae	Phoenix dactylifera	3	gene-LOC103701801, gene-LOC103710987, gene-LOC103718691
Asparagaceae	Asparagus officinalis	2	AsparagusV1_03.1903.V1.1, AsparagusV1_07.1196.V1.1
Asteraceae	Flaveria trinervia	3	Ftri1G20815, Ftri6G03081, FtriNA22549
Brassicaceae	Arabidopsis thaliana	3	AT2G01710.1, AT5G09540.1, AT5G64360.3
Brassicaceae	Eutrema salsugineum	3	Thhalv10004095m.g.v1.0, Thhalv10005716m.g.v1.0 ... Thhalv10015443m.g.v1.0
Brassicaceae	Schrenkiella parvula	3	Sp2g13160.v2.2, Sp2g27450.v2.2, Sp6g33810.v2.2
Brassicaceae	Brassica nigra	5	BniB02g052210.2N, BniB04g001370.2N, BniB04g009490.2N ... BniB06g005100.2N, BniB06g012560.2N
Casuarinaceae	Casuarina equisetifolia	1	Ceq09G0600
Casuarinaceae	Casuarina glauca	2	Cgl05G0066, Cgl09G0639
Cymodoceaceae	Cymodocea nodosa	7	gene.Cymno02g02320, gene.Cymno04g09420, gene.Cymno05g10260 ... gene.Cymno05g10290, gene.Cymno05g10310, gene.Cymno05g10330, gene.Cymno05g10340
Hydrocharitaceae	Thalassia testudinum	3	gene.Thate02g09080, gene.Thate05g11450, gene.Thate06g16530
Malvaceae	Hibiscus hamabo Siebold & Zucc.	3	nbisL1-mrna-1156, nbisL1-mrna-5709, nbisL1-mrna-9411
Nitrariaceae	Nitraria sibirica	2	evm.TU.LG06.218, evm.TU.LG08.730
Plantaginaceae	Plantago ovata	7	Pov_00002154, Pov_00002965, Pov_00026377, Pov_00026379 ... Pov_00030994, Pov_00037180, Pov_00039753
Plumbaginaceae	Limonium bicolor	5	Lb1G05860, Lb2G12106, Lb3G15518, Lb3G15519, Lb3G19215
Poaceae	Echinochloa crus-galli	15	AH01.3410, AH01.4601, AH03.3727, AH03.3729, AH08.1833 ... BH01.1692, BH01.2654, BH01.3763, BH03.2184, BH03.4005, CH01.2841, CH01.4006, CH03.2547, CH03.4274, CH08.2099
Poaceae	Eleusine coracana subsp. coracana	9	gene-QOZ80_2BG0177910, gene-QOZ80_3AG0251020 ... gene-QOZ80_3BG0277310, gene-QOZ80_6AG0538020, gene-QOZ80_6BG0491240, gene-QOZ80_7AG0577540, gene-QOZ80_7BG0608890, gene-QOZ80_8AG0634480, gene-QOZ80_8BG0663430
Poaceae	Hordeum vulgare	4	HORVU.MOREX.r3.1HG0038720.1.CDS1 ... HORVU.MOREX.r3.2HG0124170.1.CDS1, HORVU.MOREX.r3.4HG0370060.1.CDS1, HORVU.MOREX.r3.5HG0487540.1.CDS1
Poaceae	Lolium multiflorum	2	gene-QYE76_039476, gene-QYE76_067486
Poaceae	Oryza coarctata	8	Oco05G015160, Oco06G015620, Oco13G012910, Oco14G013610 ... Oco15G012650, Oco16G009950, Oco17G006880, Oco18G007040
Poaceae	Oryza sativa	5	LOC_Os01g51560.1, LOC_Os03g27460.2, LOC_Os07g42800.1 ... LOC_Os08g37270.1, LOC_Os10g23230.1
Poaceae	Paspalum vaginatum	5	gene-BS78_01G239800, gene-BS78_01G333900 ... gene-BS78_02G208500, gene-BS78_02G353000, gene-BS78_07G166500
Poaceae	Puccinellia tenuiflora	2	Pt_Chr0701809, Pt_Chr0701842
Poaceae	Sporobolus alterniflorus	14	Chr01G024880, Chr04G012800, Chr07G012230, Chr0G028100 ... Chr0G028960, Chr13G016920, Chr14G015440, Chr15G016980, Chr19G002090, Chr20G003990, Chr21G014480, Chr27G015150, Chr28G011880, Chr29G003810
Poaceae	Thinopyrum elongatum	6	Tel1E01G261400, Tel2E01G325100, Tel4E01G161000 ... Tel4E01G255700, Tel4E01G262300, Tel5E01G394600
Poaceae	Triticum dicoccoides	7	gene_TRIDC1AG021090, gene_TRIDC2AG020890 ... gene_TRIDC2BG024830, gene_TRIDC4AG024940, gene_TRIDC4BG026560, gene_TRIDC5AG038470, gene_TRIDC5BG040550
Poaceae	Triticum aestivum	11	TraesCS1A02G141000.1.cds1, TraesCS1D02G139900.1.cds1 ... TraesCS2A02G165100.1.cds1, TraesCS2B02G191300.1.cds1, TraesCS2D02G172200.1.cds1, TraesCS4A02G160900.1.cds1, TraesCS4B02G160100.1.cds1, TraesCS4D02G156000.1.cds1, TraesCS5A02G245400.1.cds1, TraesCS5B02G242900.1, TraesCS5D02G252200.1.cds1
Poaceae	Zea mays	7	Zm00001eb019140_P001, Zm00001eb027890_P001 ... Zm00001eb221380_P001, Zm00001eb315320_P001, Zm00001eb327710_P001, Zm00001eb390520_P001, Zm00001eb392490_P001
Poaceae	Zoysia japonica	8	nbis-gene-12031, nbis-gene-19630, nbis-gene-27773 ... nbis-gene-348, nbis-gene-36397, nbis-gene-52208, nbis-gene-55140, nbis-gene-57235
Poaceae	Zoysia macrostachya	7	Zma_g1075, Zma_g13141, Zma_g24234, Zma_g32693, Zma_g3505 ... Zma_g5570, Zma_g6873
Portulacaceae	Portulaca oleracea	4	evm.TU.LG05.278, evm.TU.LG08.1093, evm.TU.LG22.835 ... evm.TU.LG25.1037
Posidoniaceae	Posidonia oceanica	3	gene.Posoc01g22500, gene.Posoc02g06540, gene.Posoc02g30170
Rhizophoraceae	Bruguiera sexangula	5	evm.TU.Scaffold_1_RagTag.1940, evm.TU.Scaffold_2_RagTag.502 ... evm.TU.Scaffold_3_RagTag.1111, evm.TU.Scaffold_7_RagTag.921, evm.TU.Scaffold_8_RagTag.820
Rhizophoraceae	Carallia pectinifolia	6	nbisL1-mrna-19386, nbisL1-mrna-25548, nbisL1-mrna-4691 ... nbisL1-mrna-5725, nbisL1-mrna-873, nbisL1-mrna-9420
Rhizophoraceae	Ceriops tagal	4	nbisL1-mrna-18072, nbisL1-mrna-2057, nbisL1-mrna-4921 ... nbisL1-mrna-9469
Rhizophoraceae	Ceriops zippeliana	4	nbisL1-mrna-2363, nbisL1-mrna-3585, nbisL1-mrna-6752 ... nbisL1-mrna-9676
Rhizophoraceae	Kandelia candel	4	add.evm.TU.utg000002l.271, add.evm.TU.utg000009l.233 ... add.evm.TU.utg000016l.128, add.evm.TU.utg000019l.250
Rhizophoraceae	Kandelia obovata	2	Maker00005834, Maker00010420
Rhizophoraceae	Rhizophora apiculata	5	nbisL1-mrna-17761, nbisL1-mrna-18668, nbisL1-mrna-19216 ... nbisL1-mrna-21294, nbisL1-mrna-22013
Rhizophoraceae	Rhizophora mangle	4	nbisL1-mrna-10168, nbisL1-mrna-13883, nbisL1-mrna-16577 ... nbisL1-mrna-17042
Salicaceae	Populus euphratica	3	populus_peu22731, populus_peu24160, populus_peu32181
Solanaceae	Lycium barbarum	4	gene-LOC132598829, gene-LOC132603079, gene-LOC132614970 ... gene-LOC132627623
Solanaceae	Solanum chilense	5	SOLCI000739800, SOLCI000787100, SOLCI000787700 ... SOLCI002660000, SOLCI005950300
Solanaceae	Solanum pennellii	6	gene-LOC107003571, gene-LOC107004265, gene-LOC107004656 ... gene-LOC107004657, gene-LOC107008371, gene-LOC107026304
Tamaricaceae	Reaumuria soongarica	4	MSTRG.3092_chr02_-, STRG.5911_chr02_-, STRG.9806_chr06_+ ... gene_11317
Tamaricaceae	Tamarix chinensis	5	TC03G3023, TC09G0197, TC09G2505, TC10G0563, TC12G0632
Zosteraceae	Zostera marina	3	Zosma01g08870.v3.1, Zosma01g29390.v3.1, Zosma02g19340.v3.1