Basic Information
Locus ID:
nbisL1-mrna-23604
Species & Taxonomic ID:
Rhizophora mangle & 40031
Genome Assembly:
GCA_037832345.1
Description:
Belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 002241F_pilon | 285259 | 287707 | + | nbisL1-mrna-23604 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.43 | 21,846.26 Da | 52.53 | 92.73 | -0.16 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 4 | 109 | 7.9E-19 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 3 | 110 | 1.62E-25 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 37 | 153 | 3.9E-16 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1 | 35 | 1.5E-5 | - |
| SMART | SM00220 | serkin_6 | 1 | 167 | 6.8E-5 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 187 | 18.704241 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Pathway:
ko01521 (EGFR tyrosine kinase inhibitor resistance)
map01521 (EGFR tyrosine kinase inhibitor resistance)
ko04012 (ErbB signaling pathway)
map04012 (ErbB signaling pathway)
ko04062 (Chemokine signaling pathway)
map04062 (Chemokine signaling pathway)
ko04110 (Cell cycle)
map04110 (Cell cycle)
ko04150 (mTOR signaling pathway)
map04150 (mTOR signaling pathway)
ko04151 (PI3K-Akt signaling pathway)
map04151 (PI3K-Akt signaling pathway)
ko04310 (Wnt signaling pathway)
map04310 (Wnt signaling pathway)
ko04340 (Hedgehog signaling pathway)
map04340 (Hedgehog signaling pathway)
ko04341 (Hedgehog signaling pathway - fly)
map04341 (Hedgehog signaling pathway - fly)
ko04390 (Hippo signaling pathway)
map04390 (Hippo signaling pathway)
ko04550 (Signaling pathways regulating pluripotency of stem cells)
map04550 (Signaling pathways regulating pluripotency of stem cells)
map04657 (IL-17 signaling pathway)
map04660 (T cell receptor signaling pathway)
map04662 (B cell receptor signaling pathway)
ko04711 (Circadian rhythm - fly)
map04711 (Circadian rhythm - fly)
ko04916 (Melanogenesis)
map04916 (Melanogenesis)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G18710.1 | Protein kinase superfamily protein. ATSK (shaggy-like kinase) family member that encodes an AtSK protein involved in the cross-talk between auxin and brassinosteroid signaling pathways. BR-INSENSITIVE 2 mutant indicated that the BR-insensitive dwarf phenotype was due to a semidominant mutation in the BIN2. BIN2 is not allelic to BRI1. BIN2-mediated phosphorylation appears to promote BZR1 export from the nucleus. | 0 |
| RefSeq | XP_002522231.1 | shaggy-related protein kinase eta [Ricinus communis] | 0 |
| Q39011 | Shaggy-related protein kinase eta OS=Arabidopsis thaliana OX=3702 GN=ASK7 PE=1 SV=2 | 0 | |
| TrEMBL | A0A078JAN2 | - | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Suaeda glauca | 1 | Sgl18664 |
| Brassicaceae | Eutrema salsugineum | 3 | Thhalv10017556m.g.v1.0, Thhalv10017932m.g.v1.0 ... |
| Poaceae | Thinopyrum elongatum | 2 | Tel6E01G689200, Tel6E01G788200 |
| Poaceae | Triticum dicoccoides | 3 | gene_TRIDC1BG055520, gene_TRIDC4AG054470 ... |
| Poaceae | Triticum aestivum | 4 | TraesCS1B02G361800.1, TraesCS4A02G365100.1 ... |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-23604 |