Basic Information
Locus ID:
nbisL1-mrna-23601
Species & Taxonomic ID:
Carallia pectinifolia & 98586
Genome Assembly:
GCA_037832335.1
Description:
Serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr10 | 13379485 | 13381634 | + | nbisL1-mrna-23601 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.80 | 47,096.47 Da | 52.75 | 94.89 | -0.17 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 273 | 346 | 1.97E-13 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 270 | 370 | 3.1E-19 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 297 | 411 | 9.319266 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 303 | 325 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G25390.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_021690443.1 | LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.1 isoform X1 [Hevea brasiliensis] | 0 |
| Q9C6K9 | LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.1 OS=Arabidopsis thaliana OX=3702 GN=LRK10L-1.1 PE=2 SV=1 | 0 | |
| TrEMBL | A0A2P2MPK7 | Protein kinase domain-containing protein OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq09G2033 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_17_RagTag.879 |
| Rhizophoraceae | Carallia pectinifolia | 4 | nbisL1-mrna-23601, nbisL1-mrna-23846, nbisL1-mrna-3477 ... |
| Rhizophoraceae | Kandelia candel | 1 | evm.TU.utg000001l.31 |
| Rhizophoraceae | Kandelia obovata | 1 | Maker00004632 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-25168 |