Basic Information
Locus ID:
nbisL1-mrna-23586
Species & Taxonomic ID:
Rhizophora mangle & 40031
Genome Assembly:
GCA_037832345.1
Description:
LRR receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 001800F_pilon | 569895 | 570830 | - | nbisL1-mrna-23586 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.53 | 18,397.82 Da | 55.63 | 83.19 | -0.22 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 18 | 91 | 3.1E-11 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 10 | 93 | 1.37E-23 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 2 | 101 | 1.8E-24 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 163 | 15.170742 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G08850.2 | Leucine-rich repeat receptor-like protein kinase family protein. | 0 |
| RefSeq | XP_010645402.2 | - | 0 |
| Q8VZG8 | MDIS1-interacting receptor like kinase 2 OS=Arabidopsis thaliana OX=3702 GN=MIK2 PE=1 SV=3 | 0 | |
| TrEMBL | A0A2P2MEA4 | Receptor protein kinase OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Casuarinaceae | Casuarina equisetifolia | 4 | Ceq01G0151, Ceq01G0152, Ceq01G0572, Ceq03G0735 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl01G0684 |
| Rhizophoraceae | Rhizophora mangle | 2 | nbisL1-mrna-23586, nbisL1-mrna-23654 |