Basic Information
Locus ID:
nbisL1-mrna-23561
Species & Taxonomic ID:
Carallia pectinifolia & 98586
Genome Assembly:
GCA_037832335.1
Description:
receptor-like protein kinase At1g80640
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr10 | 13005094 | 13009421 | - | nbisL1-mrna-23561 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.01 | 36,082.88 Da | 29.42 | 70.88 | -0.29 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 245 | 318 | 5.6E-8 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 162 | 318 | 4.68E-23 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 236 | 327 | 8.3E-19 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 168 | 235 | 6.9E-7 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 97 | 329 | 11.396964 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 68 | 90 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G26970.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_021691429.1 | probable serine/threonine-protein kinase PIX13 [Hevea brasiliensis] | 0 |
| Q5PP29 | Probable serine/threonine-protein kinase PBL4 OS=Arabidopsis thaliana OX=3702 GN=PBL4 PE=2 SV=1 | 0 | |
| TrEMBL | A0A2P2JQZ0 | Serine/threonine-protein kinase cx32 OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for nbisL1-mrna-23561.