halophFGD

Basic Information

Locus ID: nbisL1-mrna-23559

Species & Taxonomic ID: Carallia pectinifolia & 98586

Genome Assembly: GCA_037832335.1

Description: belongs to the protein kinase superfamily

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr10	12998448	12999900	-	nbisL1-mrna-23559

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
4.79	8,387.85 Da	26.43	114.80	0.24

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF07714	Protein tyrosine and serine/threonine kinase	10	70	1.3E-8	IPR001245
SUPERFAMILY	SSF56112	Protein kinase-like (PK-like)	10	69	1.73E-11	IPR011009
Gene3D	G3DSA:1.10.510.10	Transferase(Phosphotransferase) domain 1	7	71	3.1E-11	-

Gene Ontology

Biological Process:

GO:0006468 (protein phosphorylation)

Molecular Function:

GO:0004672 (protein kinase activity)

KEGG Pathway

KO Term:

K00924 (receptor protein kinase TMK [EC:2.7.11.1])

Best hit

Source	Best Hit ID	Description
TAIR	AT2G17220.2	Protein kinase superfamily protein.
RefSeq	XP_018625484.1	probable serine/threonine-protein kinase PIX13 [Nicotiana tomentosiformis]
Swiss-Prot	Q9SII6	Probable serine/threonine-protein kinase PIX13 OS=Arabidopsis thaliana OX=3702 GN=PIX13 PE=1 SV=2
TrEMBL	A0A835JWB5	-

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

No network data available for this species.

Orthology

No orthogroup found for nbisL1-mrna-23559.