Basic Information
Locus ID:
nbisL1-mrna-23488
Species & Taxonomic ID:
Rhizophora mangle & 40031
Genome Assembly:
GCA_037832345.1
Short Name:
WRKY4
Description:
WRKY transcription factor
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 000021F_pilon | 174922 | 178865 | - | nbisL1-mrna-23488 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.28 | 56,464.76 Da | 53.62 | 53.24 | -0.83 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03106 | WRKY DNA -binding domain | 240 | 295 | 2.4E-24 | IPR003657 |
| Pfam | PF03106 | WRKY DNA -binding domain | 411 | 468 | 2.8E-25 | IPR003657 |
| SUPERFAMILY | SSF118290 | WRKY DNA-binding domain | 236 | 297 | 7.19E-25 | IPR036576 |
| SUPERFAMILY | SSF118290 | WRKY DNA-binding domain | 402 | 470 | 2.48E-29 | IPR036576 |
| Gene3D | G3DSA:2.20.25.80 | WRKY domain | 224 | 298 | 1.2E-26 | IPR036576 |
| Gene3D | G3DSA:2.20.25.80 | WRKY domain | 395 | 471 | 8.5E-36 | IPR036576 |
| SMART | SM00774 | WRKY_cls | 410 | 469 | 4.6E-40 | IPR003657 |
| SMART | SM00774 | WRKY_cls | 238 | 296 | 9.5E-35 | IPR003657 |
| ProSiteProfiles | PS50811 | WRKY domain profile. | 233 | 297 | 21.505266 | IPR003657 |
| ProSiteProfiles | PS50811 | WRKY domain profile. | 405 | 470 | 37.929428 | IPR003657 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 35 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 7 | 35 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 342 | 358 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 309 | 324 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 290 | 324 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 370 | 384 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 475 | 512 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 103 | 122 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 470 | 519 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 339 | 393 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G13960.1 | WRKY DNA-binding protein 4. Encodes WRKY DNA-binding protein 4 (WRKY4). | 0 |
| RefSeq | XP_021651262.1 | probable WRKY transcription factor 3 isoform X1 [Hevea brasiliensis] | 0 |
| Q9XI90 | Probable WRKY transcription factor 4 OS=Arabidopsis thaliana OX=3702 GN=WRKY4 PE=1 SV=2 | 0 | |
| TrEMBL | A0A2C9VWJ7 | WRKY transcription factor 3 OS=Manihot esculenta OX=3983 GN=MANES_05G106900 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology