Basic Information
Locus ID:
nbisL1-mrna-23488
Species & Taxonomic ID:
Rhizophora apiculata & 106626
Genome Assembly:
GCA_037832385.1
Description:
Belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr10 | 7153495 | 7154970 | - | nbisL1-mrna-23488 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.48 | 34,538.94 Da | 38.58 | 103.48 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 127 | 197 | 4.29E-6 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 103 | 192 | 1.9E-11 | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G20050.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_021641262.1 | probable receptor-like protein kinase At5g20050 [Hevea brasiliensis] | 0 |
| Q94C25 | Probable receptor-like protein kinase At5g20050 OS=Arabidopsis thaliana OX=3702 GN=At5g20050 PE=2 SV=1 | 0 | |
| TrEMBL | A0A6A6MAK7 | Protein kinase domain-containing protein OS=Hevea brasiliensis OX=3981 GN=GH714_016297 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 1 | jg15550 |
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_9019 |
| Amaranthaceae | Atriplex hortensis | 1 | Ah014430 |
| Amaranthaceae | Beta vulgaris | 2 | BVRB_8g195130, BVRB_8g195140 |
| Amaranthaceae | Salicornia bigelovii | 3 | Sbi_jg24837, Sbi_jg24838, Sbi_jg8705 |
| Amaranthaceae | Salicornia europaea | 2 | Seu_jg19903, Seu_jg19904 |
| Amaranthaceae | Suaeda aralocaspica | 2 | GOSA_00007909, GOSA_00007910 |
| Amaranthaceae | Suaeda glauca | 4 | Sgl42093, Sgl42094, Sgl46866, Sgl46867 |
| Amaranthaceae | Chenopodium album | 4 | gene:ENSEOMG00000032923, gene:ENSEOMG00000034782 ... |
| Amaranthaceae | Chenopodium quinoa | 3 | CQ.Regalona.r1.8AG0021170, CQ.Regalona.r1.8BG0021190 ... |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30255610 |
| Apiaceae | Apium graveolens | 1 | Ag4G01536 |
| Arecaceae | Cocos nucifera | 1 | scaffold002253G000030 |
| Arecaceae | Phoenix dactylifera | 2 | gene-LOC103705442, gene-LOC103721678 |
| Asparagaceae | Asparagus officinalis | 3 | AsparagusV1_01.2424.V1.1, AsparagusV1_01.2425.V1.1 ... |
| Asteraceae | Flaveria trinervia | 2 | Ftri14G25474, Ftri3G10658 |
| Brassicaceae | Arabidopsis thaliana | 1 | AT5G20050.1 |
| Brassicaceae | Eutrema salsugineum | 1 | Thhalv10013470m.g.v1.0 |
| Brassicaceae | Brassica nigra | 1 | BniB08g010230.2N |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq06G0672 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl06G0697 |
| Cymodoceaceae | Cymodocea nodosa | 1 | gene.Cymno04g10460 |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate09g13110 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG07.999 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00005433 |
| Poaceae | Echinochloa crus-galli | 1 | CH06.275 |
| Poaceae | Eleusine coracana subsp. coracana | 3 | gene-QOZ80_1AG0026600, gene-QOZ80_1BG0076890 ... |
| Poaceae | Hordeum vulgare | 4 | HORVU.MOREX.r3.1HG0002440.1, HORVU.MOREX.r3.3HG0330890.1 ... |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_027822 |
| Poaceae | Oryza coarctata | 5 | Oco02G016150, Oco05G017460, Oco06G018140, Oco11G002020 ... |
| Poaceae | Oryza sativa | 2 | LOC_Os01g46030.1, LOC_Os06g05070.1 |
| Poaceae | Paspalum vaginatum | 4 | gene-BS78_03G186300, gene-BS78_03G212100 ... |
| Poaceae | Sporobolus alterniflorus | 3 | Chr05G019580, Chr08G012830, Chr11G023190 |
| Poaceae | Thinopyrum elongatum | 2 | Tel5E01G432600, Tel7E01G189700 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC4AG058110, gene_TRIDC7AG010460 |
| Poaceae | Triticum aestivum | 4 | TraesCS1B02G018600.1.cds1, TraesCS4A02G390900.1.cds1 ... |
| Poaceae | Zea mays | 1 | Zm00001eb377370_P001 |
| Poaceae | Zoysia japonica | 2 | nbis-gene-25912, nbis-gene-40379 |
| Poaceae | Zoysia macrostachya | 2 | Zma_g10760, Zma_g29086 |
| Portulacaceae | Portulaca oleracea | 1 | evm.TU.LG23.1158 |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc09g12370 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_10_RagTag.357 |
| Rhizophoraceae | Carallia pectinifolia | 2 | nbisL1-mrna-13184, nbisL1-mrna-13212 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-3727 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-16760 |
| Rhizophoraceae | Kandelia candel | 1 | add.evm.TU.utg000033l.76 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-23488 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-14731 |
| Salicaceae | Populus euphratica | 2 | populus_peu05089, populus_peu31248 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132605606 |
| Solanaceae | Solanum chilense | 1 | SOLCI001973900 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107022042 |
| Tamaricaceae | Reaumuria soongarica | 1 | gene_9543 |
| Tamaricaceae | Tamarix chinensis | 1 | TC12G1225 |
| Zosteraceae | Zostera marina | 1 | Zosma01g07800.v3.1 |