Basic Information
Locus ID:
nbisL1-mrna-23484
Species & Taxonomic ID:
Rhizophora mangle & 40031
Genome Assembly:
GCA_037832345.1
Description:
CSC1-like protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 000021F_pilon | 135572 | 144991 | + | nbisL1-mrna-23484 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.63 | 80,601.93 Da | 42.36 | 107.87 | 0.32 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02714 | Calcium-dependent channel, 7TM region, putative phosphate | 316 | 501 | 4.0E-41 | IPR003864 |
| Pfam | PF14703 | Cytosolic domain of 10TM putative phosphate transporter | 272 | 315 | 2.7E-9 | IPR027815 |
| Pfam | PF14703 | Cytosolic domain of 10TM putative phosphate transporter | 141 | 250 | 1.5E-14 | IPR027815 |
| Pfam | PF13967 | Late exocytosis, associated with Golgi transport | 5 | 146 | 1.4E-29 | IPR032880 |
| Coils | Coil | Coil | 216 | 243 | - | - |
Gene Ontology
Cellular Component:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G69450.1 | Early-responsive to dehydration stress protein (ERD4). | 0 |
| RefSeq | XP_021651458.1 | CSC1-like protein At1g69450 [Hevea brasiliensis] | 0 |
| F4I248 | CSC1-like protein At1g69450 OS=Arabidopsis thaliana OX=3702 GN=At1g69450 PE=2 SV=1 | 0 | |
| TrEMBL | A0A2P2LA63 | CSC1-like protein OS=Rhizophora mucronata OX=61149 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology