Basic Information
Locus ID:
nbisL1-mrna-2348
Species & Taxonomic ID:
Hibiscus hamabo Siebold & Zucc. & 1841
Description:
SRSF protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 19928575 | 19931952 | + | nbisL1-mrna-2348 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.86 | 64,223.92 Da | 32.68 | 73.88 | -0.63 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14136 | STKc_SRPK | 33 | 506 | 0.0 | - |
| Pfam | PF00069 | Protein kinase domain | 44 | 183 | 1.4E-20 | IPR000719 |
| Pfam | PF00069 | Protein kinase domain | 317 | 506 | 1.9E-21 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 39 | 515 | 2.24E-79 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 127 | 507 | 5.6E-76 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 20 | 126 | 2.7E-41 | - |
| SMART | SM00220 | serkin_6 | 44 | 506 | 1.8E-54 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 44 | 506 | 30.166916 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 171 | 183 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 50 | 73 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 240 | 259 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 260 | 280 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 526 | 541 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 516 | 541 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 213 | 306 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 23 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 284 | 306 | - | - |
| Coils | Coil | Coil | 569 | 569 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G44850.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_039048612.1 | SRSF protein kinase 2-like [Hibiscus syriacus] | 0 |
| Q45FA5 | Serine/threonine-protein kinase SRPK OS=Physarum polycephalum OX=5791 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6A2XPS0 | SRSF protein kinase 1 OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00116954pilonHSYRG00250 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology