Basic Information
Locus ID:
nbisL1-mrna-23435
Species & Taxonomic ID:
Carallia pectinifolia & 98586
Genome Assembly:
GCA_037832335.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr10 | 11595354 | 11599315 | - | nbisL1-mrna-23435 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.57 | 102,788.80 Da | 36.24 | 86.92 | -0.17 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 599 | 872 | 1.87343E-98 | - |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 37 | 70 | 1.6E-6 | IPR013210 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 338 | 373 | 9.1E-4 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 247 | 304 | 7.2E-7 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 596 | 868 | 5.8E-49 | IPR001245 |
| SUPERFAMILY | SSF52058 | L domain-like | 46 | 445 | 2.64E-50 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 568 | 878 | 3.5E-81 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 555 | 670 | 8.6E-37 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 35 | 333 | 5.0E-80 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 336 | 461 | 4.1E-33 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 671 | 880 | 1.6E-58 | - |
| SMART | SM00369 | LRR_typ_2 | 268 | 290 | 280.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 593 | 873 | 1.6E-43 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 193 | 216 | 260.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 399 | 423 | 84.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 291 | 318 | 200.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 118 | 141 | 0.015 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 593 | 873 | 40.484737 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 599 | 621 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 718 | 730 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 913 | 945 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 471 | 491 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 473 | 491 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 913 | 934 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G66150.1 | transmembrane kinase 1. receptor-like transmembrane kinase I (TMK1) | 0 |
| RefSeq | XP_021641290.1 | receptor protein kinase TMK1-like isoform X1 [Hevea brasiliensis] | 0 |
| P43298 | Receptor protein kinase TMK1 OS=Arabidopsis thaliana OX=3702 GN=TMK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2P2L8F0 | Receptor protein kinase OS=Rhizophora mucronata OX=61149 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology