Basic Information
Locus ID:
nbisL1-mrna-2341
Species & Taxonomic ID:
Hibiscus hamabo Siebold & Zucc. & 1841
Description:
Serine threonine-protein kinase-like protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 19888520 | 19890940 | - | nbisL1-mrna-2341 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.94 | 86,864.05 Da | 42.22 | 90.19 | 0.02 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 497 | 782 | 1.04809E-90 | - |
| Pfam | PF00069 | Protein kinase domain | 492 | 778 | 4.8E-43 | IPR000719 |
| Pfam | PF13540 | Regulator of chromosome condensation (RCC1) repeat | 208 | 235 | 3.3E-5 | - |
| SUPERFAMILY | SSF50985 | RCC1/BLIP-II | 32 | 274 | 2.49E-22 | IPR009091 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 469 | 780 | 9.17E-73 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 575 | 796 | 2.5E-49 | - |
| Gene3D | G3DSA:2.130.10.30 | - | 64 | 315 | 8.3E-29 | IPR009091 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 452 | 574 | 3.1E-32 | - |
| SMART | SM00220 | serkin_6 | 491 | 752 | 2.2E-24 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 491 | 784 | 36.032524 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 625 | 637 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 497 | 529 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G55950.1 | CRINKLY4 related 3. | 0 |
| RefSeq | XP_039031198.1 | putative serine/threonine-protein kinase-like protein CCR3 [Hibiscus syriacus] | 0 |
| Q9LY50 | Putative serine/threonine-protein kinase-like protein CCR3 OS=Arabidopsis thaliana OX=3702 GN=CCR3 PE=2 SV=1 | 0 | |
| TrEMBL | A0A6A2YD20 | Putative serine/threonine-protein kinase-like protein CCR3 OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00111614pilonHSYRG00066 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology