Basic Information
Locus ID:
nbisL1-mrna-23408
Species & Taxonomic ID:
Rhizophora mangle & 40031
Genome Assembly:
GCA_037832345.1
Description:
strubbelig-receptor family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 002214F_pilon | 134949 | 140012 | - | nbisL1-mrna-23408 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.39 | 72,483.34 Da | 39.94 | 93.40 | -0.08 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 369 | 640 | 1.89501E-86 | - |
| Pfam | PF00069 | Protein kinase domain | 365 | 635 | 2.5E-43 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 23 | 58 | 5.9E-6 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 40 | 206 | 1.25E-28 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 338 | 637 | 1.14E-74 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 442 | 664 | 7.0E-57 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 22 | 238 | 1.1E-36 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 331 | 440 | 1.2E-30 | - |
| SMART | SM00369 | LRR_typ_2 | 178 | 200 | 120.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 130 | 153 | 10.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 84 | 112 | 38.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 154 | 177 | 290.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 363 | 640 | 36.880566 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 227 | 253 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G22130.1 | STRUBBELIG-receptor family 8. | 0 |
| RefSeq | XP_021637699.1 | protein STRUBBELIG-RECEPTOR FAMILY 8-like [Hevea brasiliensis] | 0 |
| Q6R2J8 | Protein STRUBBELIG-RECEPTOR FAMILY 8 OS=Arabidopsis thaliana OX=3702 GN=SRF8 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2K1YE58 | - | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology