Basic Information
Locus ID:
nbisL1-mrna-23391
Species & Taxonomic ID:
Rhizophora apiculata & 106626
Genome Assembly:
GCA_037832385.1
Description:
cyclin-dependent protein serine/threonine kinase activity
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr10 | 9683349 | 9684650 | - | nbisL1-mrna-23391 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.29 | 15,849.92 Da | 41.55 | 97.57 | 0.03 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 15 | 139 | 2.1E-15 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 14 | 141 | 6.09E-22 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 10 | 144 | 9.0E-24 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 139 | 11.80685 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G76540.1 | cyclin-dependent kinase B2;1. Encodes a cyclin-dependent protein kinase involved in regulation of the G2/M transition of the mitotic cell cycle. Specifically binds to the cyclin CYCD4;1, expressed in shoot meristem, young leaves and vascular tissue during the G2/M phase. Required for proper organization of the shoot apical meristem and for hormone signaling. | 0 |
| RefSeq | XP_030943696.1 | cell division control protein 2 homolog [Quercus lobata] | 0 |
| P93101 | Cell division control protein 2 homolog OS=Oxybasis rubra OX=3560 GN=CDC2 PE=2 SV=1 | 0 | |
| TrEMBL | A0A7N2MU24 | Protein kinase domain-containing protein OS=Quercus lobata OX=97700 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 1 | jg18402 |
| Amaranthaceae | Chenopodium album | 1 | gene:ENSEOMG00000036313 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl01G2392 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00029129 |
| Poaceae | Zea mays | 2 | Zm00001eb036430_P001, Zm00001eb160860_P001 |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc01g28000 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-23391 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-18052 |