Basic Information
Locus ID:
nbisL1-mrna-23384
Species & Taxonomic ID:
Rhizophora mangle & 40031
Genome Assembly:
GCA_037832345.1
Description:
Leucine-rich repeat receptor-like kinase protein FLORAL ORGAN NUMBER1
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 002214F_pilon | 12901 | 15055 | - | nbisL1-mrna-23384 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.31 | 48,662.96 Da | 45.67 | 90.42 | -0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00560 | Leucine Rich Repeat | 159 | 178 | 0.56 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 61 | 101 | 5.3E-6 | IPR013210 |
| Pfam | PF13516 | Leucine Rich repeat | 181 | 196 | 0.81 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 118 | 419 | 1.7E-36 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 59 | 231 | 2.0E-37 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 232 | 425 | 1.4E-23 | IPR032675 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G17640.1 | Leucine-rich repeat (LRR) family protein. | 0 |
| RefSeq | XP_034927020.1 | probably inactive leucine-rich repeat receptor-like protein kinase IMK2 [Populus alba] | 0 |
| TrEMBL | A0A4V6A9P4 | - | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology