Basic Information
Locus ID:
nbisL1-mrna-23369
Species & Taxonomic ID:
Rhizophora mangle & 40031
Genome Assembly:
GCA_037832345.1
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 002092F_pilon | 558598 | 560122 | + | nbisL1-mrna-23369 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.45 | 16,284.90 Da | 50.64 | 109.58 | 0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G15900.1 | 0 | |
| RefSeq | XP_021298433.1 | - | 0 |
| TrEMBL | A0A2P2J215 | Uncharacterized protein MANES_04G111800 OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 1 | jg29884 |
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_21406 |
| Amaranthaceae | Atriplex hortensis | 1 | Ah010550 |
| Amaranthaceae | Beta vulgaris | 1 | BVRB_9g219270 |
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg11588, Sbi_jg46528 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg20844 |
| Amaranthaceae | Suaeda glauca | 2 | Sgl56380, Sgl61911 |
| Amaranthaceae | Chenopodium album | 2 | gene:ENSEOMG00000016711, gene:ENSEOMG00000050239 |
| Amaranthaceae | Chenopodium quinoa | 2 | CQ.Regalona.r1.7BG0009720, CQ.Regalona.r1.9AG0014910 |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30128510 |
| Apiaceae | Apium graveolens | 1 | Ag9G01180 |
| Arecaceae | Cocos nucifera | 1 | COCNU_01G018630 |
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_05.2329.V1.1 |
| Asteraceae | Flaveria trinervia | 1 | Ftri4G26162 |
| Brassicaceae | Arabidopsis thaliana | 1 | AT3G15900.1 |
| Brassicaceae | Eutrema salsugineum | 1 | Thhalv10021721m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 1 | Sp3g14230.v2.2 |
| Brassicaceae | Brassica nigra | 1 | BniB07g053890.2N |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq02G0331 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl02G0345 |
| Cymodoceaceae | Cymodocea nodosa | 1 | gene.Cymno02g11430 |
| Dunaliellaceae | Dunaliella salina | 1 | Dusal.0105s00015.v1.0 |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate01g03430 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00014819 |
| Poaceae | Echinochloa crus-galli | 2 | BH07.3655, CH07.3730 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_2AG0149530, gene-QOZ80_2BG0204710 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.6HG0626850.1 |
| Poaceae | Oryza coarctata | 2 | Oco03G024610, Oco04G025090 |
| Poaceae | Oryza sativa | 1 | LOC_Os02g56030.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_04G310600 |
| Poaceae | Puccinellia tenuiflora | 2 | Pt_Chr0206060, Pt_Chr0206137 |
| Poaceae | Sporobolus alterniflorus | 3 | Chr06G000230, Chr0G032930, Chr15G001420 |
| Poaceae | Thinopyrum elongatum | 1 | Tel6E01G670300 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC6AG055660, gene_TRIDC6BG065110 |
| Poaceae | Triticum aestivum | 3 | TraesCS6A02G372600.1, TraesCS6B02G410500.1 ... |
| Poaceae | Zea mays | 1 | Zm00001eb192090_P001 |
| Poaceae | Zoysia japonica | 2 | nbis-gene-39877, nbis-gene-8397 |
| Poaceae | Zoysia macrostachya | 2 | Zma_g14648, Zma_g17362 |
| Portulacaceae | Portulaca oleracea | 2 | evm.TU.LG06.1263, evm.TU.LG11.610 |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc02g04170 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_18_RagTag.400 |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-28121 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-7844 |
| Rhizophoraceae | Kandelia obovata | 1 | Maker00019132 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-7265 |
| Rhizophoraceae | Rhizophora mangle | 2 | nbisL1-mrna-23368, nbisL1-mrna-23369 |
| Salicaceae | Populus euphratica | 1 | populus_peu02589 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132633007 |
| Solanaceae | Solanum chilense | 1 | SOLCI007110600 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107014379 |
| Tamaricaceae | Reaumuria soongarica | 1 | STRG.19242_chr07_- |
| Tamaricaceae | Tamarix chinensis | 1 | TC08G2220 |
| Zosteraceae | Zostera marina | 1 | Zosma01g32600.v3.1 |