Basic Information
Locus ID:
nbisL1-mrna-23359
Species & Taxonomic ID:
Carallia pectinifolia & 98586
Genome Assembly:
GCA_037832335.1
Description:
PAPA-1-like conserved region
Maps and Mapping Data
| Chromosome/Scaffold | Start | End | Strand | ID |
|---|---|---|---|---|
| chr10 | 10725496 | 10729396 | + | nbisL1-mrna-23359 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.91 | 38,537.63 Da | 37.55 | 50.11 | -1.18 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | mobidb-lite | consensus disorder prediction | 130 | 244 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 24 | 49 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 300 | 316 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 289 | 337 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 198 | 221 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 118 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 130 | 184 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 62 | 80 | - | - |
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G56460.1 | HIT zinc finger ;PAPA-1-like conserved region. | 0 |
| RefSeq | XP_043815083.1 | uncharacterized protein LOC110621561 [Manihot esculenta] | 0 |
| TrEMBL | A0A2P2IPX7 | PAPA-1 domain-containing protein OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology