Basic Information
Locus ID:
nbisL1-mrna-23298
Species & Taxonomic ID:
Rhizophora mangle & 40031
Genome Assembly:
GCA_037832345.1
Description:
strubbelig-receptor family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 002230F_pilon | 533562 | 539113 | + | nbisL1-mrna-23298 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.20 | 73,712.07 Da | 45.04 | 92.93 | -0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13516 | Leucine Rich repeat | 113 | 127 | 1.5 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 134 | 194 | 6.8E-8 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 398 | 553 | 1.3E-28 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 484 | 496 | 110.0 | IPR013210 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 46 | 85 | 1.5E-7 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 42 | 229 | 9.45E-34 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 371 | 645 | 2.08E-53 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 43 | 274 | 8.9E-41 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 362 | 473 | 6.8E-31 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 474 | 566 | 4.3E-21 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 567 | 674 | 1.7E-9 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 396 | 679 | 25.488562 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 245 | 278 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G22130.1 | STRUBBELIG-receptor family 8. | 0 |
| RefSeq | XP_048229860.1 | protein STRUBBELIG-RECEPTOR FAMILY 8 [Ricinus communis] | 0 |
| Q6R2J8 | Protein STRUBBELIG-RECEPTOR FAMILY 8 OS=Arabidopsis thaliana OX=3702 GN=SRF8 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2P2KHE3 | Uncharacterized protein MANES_16G003200 OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology