halophFGD

Basic Information

Locus ID: nbisL1-mrna-23297

Species & Taxonomic ID: Rhizophora apiculata & 106626

Genome Assembly: GCA_037832385.1

Description: D-mannose binding lectin

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr12	10232380	10233509	+	nbisL1-mrna-23297

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
6.28	24,528.52 Da	52.76	65.11	-0.39

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF08276	PAN-like domain	124	170	2.9E-5	IPR003609

Best hit

Source	Best Hit ID	Description
RefSeq	XP_022758310.1	G-type lectin S-receptor-like serine/threonine-protein kinase LECRK3 [Durio zibethinus]
Swiss-Prot	Q7FAZ3	G-type lectin S-receptor-like serine/threonine-protein kinase LECRK1 OS=Oryza sativa subsp. japonica OX=39947 GN=LECRK1 PE=2 SV=1
TrEMBL	A0A2P2MHV2	Serine/threonine-protein kinase OS=Rhizophora mucronata OX=61149 PE=4 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

No network data available for this species.

Orthology

Family	Species	Count	Orthologous Genes
Acanthaceae	Avicennia marina	26	jg15251, jg16266, jg16273, jg16275, jg16278, jg16279, jg1653 ... jg16280, jg16281, jg29742, jg35526, jg37750, jg37751, jg3903, jg39632, jg39633, jg39634, jg39635, jg39636, jg40976, jg5806, jg5807, jg8598, jg8599, jg8600, jg9081
Aizoaceae	Mesembryanthemum crystallinum	2	gene_10512, gene_8410
Amaranthaceae	Atriplex hortensis	15	Ah004908, Ah004915, Ah004916, Ah004917, Ah004918, Ah004919 ... Ah004920, Ah004921, Ah004923, Ah004924, Ah004925, Ah004927, Ah036080, Ah036081, Ah036082
Amaranthaceae	Beta vulgaris	11	BVRB_4g071770, BVRB_4g071780, BVRB_4g071790, BVRB_4g071800 ... BVRB_4g071870, BVRB_4g071920, BVRB_4g071930, BVRB_4g071960, BVRB_4g071970, BVRB_4g079680, BVRB_9g209640
Amaranthaceae	Salicornia bigelovii	10	Sbi_jg1035, Sbi_jg17903, Sbi_jg17905, Sbi_jg35638 ... Sbi_jg36269, Sbi_jg36270, Sbi_jg36271, Sbi_jg39965, Sbi_jg55297, Sbi_jg62539
Amaranthaceae	Salicornia europaea	6	Seu_jg1111, Seu_jg1112, Seu_jg14369, Seu_jg3673, Seu_jg4327 ... Seu_jg4328
Amaranthaceae	Suaeda aralocaspica	14	GOSA_00007120, GOSA_00007121, GOSA_00007122, GOSA_00007123 ... GOSA_00007124, GOSA_00007125, GOSA_00007126, GOSA_00007131, GOSA_00007132, GOSA_00014123, GOSA_00014126, GOSA_00014127, GOSA_00014128, GOSA_00017303
Amaranthaceae	Suaeda glauca	14	Sgl12130, Sgl17411, Sgl17412, Sgl17416, Sgl28796, Sgl34048 ... Sgl38473, Sgl39434, Sgl71096, Sgl74670, Sgl82944, Sgl82946, Sgl82948, Sgl82954
Amaranthaceae	Chenopodium album	13	gene:ENSEOMG00000008572, gene:ENSEOMG00000008901 ... gene:ENSEOMG00000009692, gene:ENSEOMG00000011559, gene:ENSEOMG00000026785, gene:ENSEOMG00000029627, gene:ENSEOMG00000032533, gene:ENSEOMG00000033409, gene:ENSEOMG00000033641, gene:ENSEOMG00000040897, gene:ENSEOMG00000040981, gene:ENSEOMG00000041725, gene:ENSEOMG00000048780
Amaranthaceae	Chenopodium quinoa	19	CQ.Regalona.r1.1AG0022000, CQ.Regalona.r1.1AG0022040 ... CQ.Regalona.r1.1BG0002330, CQ.Regalona.r1.1BG0002360, CQ.Regalona.r1.4AG0000700, CQ.Regalona.r1.4AG0000710, CQ.Regalona.r1.4AG0000720, CQ.Regalona.r1.4AG0000770, CQ.Regalona.r1.4AG0000790, CQ.Regalona.r1.4AG0000800, CQ.Regalona.r1.4BG0000840, CQ.Regalona.r1.4BG0000890, CQ.Regalona.r1.4BG0000900, CQ.Regalona.r1.4BG0000910, CQ.Regalona.r1.4BG0000930, CQ.Regalona.r1.4BG0000940, CQ.Regalona.r1.4BG0000950, CQ.Regalona.r1.4BG0000960, CQ.Regalona.r1.4BG0000980
Anacardiaceae	Pistacia vera	37	pistato.v30038760, pistato.v30038770, pistato.v30050100 ... pistato.v30050120, pistato.v30050140, pistato.v30050150, pistato.v30050160, pistato.v30050170, pistato.v30050180, pistato.v30050190, pistato.v30050200, pistato.v30050220, pistato.v30050240, pistato.v30053870, pistato.v30079950, pistato.v30110350, pistato.v30110380, pistato.v30110400, pistato.v30110410, pistato.v30142150, pistato.v30197150, pistato.v30197180, pistato.v30197190, pistato.v30197220, pistato.v30200660, pistato.v30200670, pistato.v30200680, pistato.v30200700, pistato.v30200720, pistato.v30200730, pistato.v30200740, pistato.v30200780, pistato.v30200820, pistato.v30231040, pistato.v30258460, pistato.v30264080, pistato.v30264100
Apiaceae	Apium graveolens	9	Ag1G00444, Ag3G01207, Ag7G02093, Ag7G02227, Ag7G02230 ... Ag7G02233, Ag7G02234, Ag7G02235, AgUnG00208
Arecaceae	Cocos nucifera	17	COCNU_01G007190, COCNU_01G011550, COCNU_06G000450 ... COCNU_06G010790, COCNU_06G010800, COCNU_07G013370, COCNU_11G007140, COCNU_11G010470, COCNU_15G001190, COCNU_15G001200, COCNU_15G001350, COCNU_15G001360, COCNU_15G001390, COCNU_15G001400, COCNU_15G001430, scaffold008173G000010, scaffold008462G000110
Arecaceae	Phoenix dactylifera	14	gene-LOC103695870, gene-LOC103697208, gene-LOC103697296 ... gene-LOC103697956, gene-LOC103698627, gene-LOC103699564, gene-LOC103699774, gene-LOC103702294, gene-LOC103705441, gene-LOC103714319, gene-LOC103720252, gene-LOC120106092, gene-LOC120110553, gene-LOC120113109
Asparagaceae	Asparagus officinalis	3	AsparagusV1_01.938.V1.1, AsparagusV1_01.939.V1.1 ... AsparagusV1_01.950.V1.1
Asteraceae	Flaveria trinervia	10	Ftri11G15841, Ftri12G01766, Ftri12G09050, Ftri12G23234 ... Ftri14G24589, Ftri14G31970, Ftri2G28727, Ftri2G29247, Ftri6G13034, Ftri9G10648
Brassicaceae	Arabidopsis thaliana	1	AT5G60900.1
Brassicaceae	Brassica nigra	3	BniB02g076210.2N, BniB04g003000.2N, BniB07g040980.2N
Casuarinaceae	Casuarina equisetifolia	37	Ceq03G1953, Ceq03G1954, Ceq03G1955, Ceq05G1969, Ceq05G1977 ... Ceq05G2075, Ceq05G2078, Ceq05G2084, Ceq05G2085, Ceq05G2088, Ceq05G2089, Ceq05G2090, Ceq05G2098, Ceq05G2107, Ceq05G2108, Ceq05G2109, Ceq06G1895, Ceq06G1896, Ceq06G1898, Ceq06G1899, Ceq06G1901, Ceq06G1902, Ceq06G1903, Ceq06G2402, Ceq07G2201, Ceq07G2219, Ceq07G2220, Ceq07G2221, Ceq07G2222, Ceq07G2223, Ceq07G2228, Ceq07G2229, Ceq09G1762, Ceq09G1765, Ceq09G1766, Ceq09G1767, Ceq09G1768
Casuarinaceae	Casuarina glauca	61	Cgl03G2100, Cgl03G2101, Cgl04G0189, Cgl05G1947, Cgl05G2086 ... Cgl05G2088, Cgl05G2091, Cgl05G2093, Cgl05G2095, Cgl05G2097, Cgl05G2102, Cgl05G2104, Cgl05G2105, Cgl05G2107, Cgl05G2112, Cgl05G2113, Cgl05G2128, Cgl05G2146, Cgl05G2147, Cgl05G2148, Cgl05G2150, Cgl05G2154, Cgl05G2158, Cgl05G2160, Cgl05G2166, Cgl05G2167, Cgl05G2171, Cgl05G2175, Cgl05G2199, Cgl05G2200, Cgl05G2203, Cgl05G2204, Cgl06G1971, Cgl06G1972, Cgl06G1973, Cgl06G1974, Cgl06G1975, Cgl06G1977, Cgl06G1978, Cgl06G1985, Cgl06G1986, Cgl06G1988, Cgl06G1989, Cgl06G1991, Cgl06G1992, Cgl07G2409, Cgl07G2429, Cgl07G2431, Cgl07G2433, Cgl07G2435, Cgl07G2436, Cgl07G2438, Cgl07G2538, Cgl07G2540, Cgl07G2541, Cgl07G2584, Cgl07G2585, Cgl07G2586, Cgl09G1939, Cgl09G1941, Cgl09G1942
Cymodoceaceae	Cymodocea nodosa	2	gene.Cymno06g08690, gene.Cymno12g04000
Hydrocharitaceae	Thalassia testudinum	1	gene.Thate06g25080
Malvaceae	Hibiscus hamabo Siebold & Zucc.	2	nbisL1-mrna-365, nbisL1-mrna-7253
Nitrariaceae	Nitraria sibirica	4	evm.TU.LG03.17, evm.TU.LG10.1147, evm.TU.LG10.1149 ... evm.TU.LG10.1150
Plantaginaceae	Plantago ovata	8	Pov_00020744, Pov_00020745, Pov_00022526, Pov_00024486 ... Pov_00024489, Pov_00024491, Pov_00024493, Pov_00024496
Plumbaginaceae	Limonium bicolor	7	Lb1G04573, Lb1G04575, Lb1G04576, Lb1G04577, Lb1G04578 ... Lb2G14005, Lb6G31299
Poaceae	Echinochloa crus-galli	4	AH06.2320, BH06.2121, BH09.354, CH06.2341
Poaceae	Eleusine coracana subsp. coracana	12	gene-QOZ80_1AG0014590, gene-QOZ80_1AG0042130 ... gene-QOZ80_1BG0060500, gene-QOZ80_1BG0063460, gene-QOZ80_1BG0091950, gene-QOZ80_4AG0326070, gene-QOZ80_4BG0344890, gene-QOZ80_5AG0360830, gene-QOZ80_5BG0409280, gene-QOZ80_6AG0545140, gene-QOZ80_6AG0545160, gene-QOZ80_6BG0498640
Poaceae	Hordeum vulgare	10	HORVU.MOREX.r3.2HG0102890.1.CDS1 ... HORVU.MOREX.r3.2HG0102910.1.CDS1, HORVU.MOREX.r3.3HG0233090.1.CDS1, HORVU.MOREX.r3.3HG0282160.1.CDS1, HORVU.MOREX.r3.5HG0536970.1.CDS1, HORVU.MOREX.r3.7HG0647370.1.CDS1, HORVU.MOREX.r3.7HG0724190.1.CDS1, HORVU.MOREX.r3.7HG0724260.1.CDS1, HORVU.MOREX.r3.7HG0724280.1.CDS1, HORVU.MOREX.r3.7HG0724380.1.CDS1
Poaceae	Lolium multiflorum	10	gene-QYE76_008757, gene-QYE76_023360, gene-QYE76_023374 ... gene-QYE76_031902, gene-QYE76_034688, gene-QYE76_038221, gene-QYE76_053617, gene-QYE76_054715, gene-QYE76_054716, gene-QYE76_059694
Poaceae	Oryza coarctata	10	Oco05G027900, Oco06G028870, Oco07G001430, Oco07G001440 ... Oco07G008440, Oco08G001820, Oco08G008320, Oco11G012990, Oco12G014380, Oco15G004590
Poaceae	Oryza sativa	13	LOC_Os01g73390.1, LOC_Os03g61310.1, LOC_Os04g12540.1 ... LOC_Os04g12560.1, LOC_Os04g12580.1, LOC_Os04g12600.1, LOC_Os04g39910.1, LOC_Os04g39930.1, LOC_Os06g41500.1, LOC_Os06g41510.1, LOC_Os06g41560.1, LOC_Os08g13420.1, LOC_Os08g13870.1
Poaceae	Paspalum vaginatum	10	gene-BS78_03G413700, gene-BS78_06G032000 ... gene-BS78_06G032200, gene-BS78_06G032300, gene-BS78_06G132400, gene-BS78_07G041900, gene-BS78_10G032800, gene-BS78_10G085000, gene-BS78_10G085100, gene-BS78_10G194200
Poaceae	Puccinellia tenuiflora	1	Pt_Chr0400800
Poaceae	Sporobolus alterniflorus	5	Chr16G011270, Chr17G010200, Chr23G017170, Chr23G017560 ... Chr26G002120
Poaceae	Thinopyrum elongatum	11	Tel2E01G125600, Tel2E01G126600, Tel2E01G126700 ... Tel2E01G127000, Tel3E01G156400, Tel3E01G432700, Tel6E01G239200, Tel6E01G239400, Tel7E01G683400, Tel7E01G683500, Tel7E01G684700
Poaceae	Triticum dicoccoides	22	gene_TRIDC2AG005740, gene_TRIDC2AG005750 ... gene_TRIDC2AG048810, gene_TRIDC2BG006350, gene_TRIDC2BG006480, gene_TRIDC3AG010670, gene_TRIDC3BG014470, gene_TRIDC3BG043840, gene_TRIDC4AG061120, gene_TRIDC4AG071670, gene_TRIDC6AG013930, gene_TRIDC6AG031380, gene_TRIDC7AG003690, gene_TRIDC7AG008870, gene_TRIDC7AG055770, gene_TRIDC7AG055800, gene_TRIDC7AG055850, gene_TRIDC7AG055910, gene_TRIDC7BG048130, gene_TRIDC7BG048160, gene_TRIDC7BG048170, gene_TRIDC7BG048210
Poaceae	Triticum aestivum	34	TraesCS2A02G053000.1, TraesCS2A02G053100.1.cds1 ... TraesCS2B02G065900.1.cds1, TraesCS2B02G067000.3.cds1, TraesCS2D02G052800.1.cds1, TraesCS2D02G053300.1.cds1, TraesCS3B02G103600.1.cds1, TraesCS3B02G291900.1.cds1, TraesCS4A02G375900.1.cds1, TraesCS4A02G451100.1.cds1, TraesCS4A02G487000.1.cds1, TraesCS4A02G488900.1.cds1, TraesCS6A02G107500.1, TraesCS6A02G204600.1.cds1, TraesCS6B02G136100.1.cds1, TraesCS6B02G136200.1.cds1, TraesCS6B02G225800.1.cds1, TraesCS6D02G189800.1.cds1, TraesCS7A02G037300.1.cds1, TraesCS7A02G077300.1.cds1, TraesCS7A02G400600.1.cds1, TraesCS7A02G400900.1.cds1, TraesCS7A02G401400.1.cds1, TraesCS7B02G300400.1.cds1, TraesCS7B02G300600.1.cds1, TraesCS7B02G300700.1, TraesCS7B02G301100.1.cds1, TraesCS7B02G301200.1.cds1, TraesCS7B02G301500.1.cds1, TraesCS7D02G059400.1.cds1, TraesCS7D02G072900.1.cds1, TraesCS7D02G394100.1.cds1, TraesCS7D02G394400.2.cds1, TraesCS7D02G394800.1.cds1
Poaceae	Zea mays	5	Zm00001eb028010_P001, Zm00001eb140230_P001 ... Zm00001eb268980_P001, Zm00001eb388090_P001, Zm00001eb419700_P001
Poaceae	Zoysia japonica	8	nbis-gene-10009, nbis-gene-13202, nbis-gene-13512 ... nbis-gene-17913, nbis-gene-32146, nbis-gene-32148, nbis-gene-36721, nbis-gene-9868
Poaceae	Zoysia macrostachya	7	Zma_g20961, Zma_g20963, Zma_g25030, Zma_g27895, Zma_g27896 ... Zma_g30920, Zma_g7727
Portulacaceae	Portulaca oleracea	15	evm.TU.LG03.561, evm.TU.LG03.563, evm.TU.LG05.1427 ... evm.TU.LG07.1450, evm.TU.LG08.1695, evm.TU.LG12.1160, evm.TU.LG12.1161, evm.TU.LG12.1747, evm.TU.LG18.1153, evm.TU.LG18.1154, evm.TU.LG18.1155, evm.TU.LG20.719, evm.TU.LG20.720, evm.TU.LG22.608, evm.TU.LG22.609
Rhizophoraceae	Bruguiera sexangula	11	evm.TU.37730.5, evm.TU.43027.2, evm.TU.Scaffold_1_RagTag.918 ... evm.TU.Scaffold_14_RagTag.395, evm.TU.Scaffold_14_RagTag.396, evm.TU.Scaffold_1_RagTag.932, evm.TU.Scaffold_6_RagTag.1431, evm.TU.Scaffold_6_RagTag.1558, evm.TU.Scaffold_6_RagTag.1565, evm.TU.Scaffold_7_RagTag.1212, evm.TU.Scaffold_880_RagTag.7
Rhizophoraceae	Carallia pectinifolia	5	nbisL1-mrna-17613, nbisL1-mrna-17614, nbisL1-mrna-17964 ... nbisL1-mrna-18626, nbisL1-mrna-18628
Rhizophoraceae	Ceriops tagal	1	nbisL1-mrna-1089
Rhizophoraceae	Ceriops zippeliana	4	nbisL1-mrna-12207, nbisL1-mrna-8326, nbisL1-mrna-8327 ... nbisL1-mrna-8329
Rhizophoraceae	Kandelia candel	9	add.evm.TU.utg000002l.143, add.evm.TU.utg000007l.89 ... add.evm.TU.utg000007l.90, add.evm.TU.utg000007l.91, add.evm.TU.utg000007l.92, add.evm.TU.utg000007l.93, add.evm.TU.utg000011l.369, add.evm.TU.utg000011l.370, add.evm.TU.utg000011l.371
Rhizophoraceae	Kandelia obovata	1	Maker00018681
Rhizophoraceae	Rhizophora apiculata	20	nbisL1-mrna-16169, nbisL1-mrna-16170, nbisL1-mrna-16171 ... nbisL1-mrna-20297, nbisL1-mrna-22852, nbisL1-mrna-22853, nbisL1-mrna-23074, nbisL1-mrna-23075, nbisL1-mrna-23076, nbisL1-mrna-23077, nbisL1-mrna-23079, nbisL1-mrna-23081, nbisL1-mrna-23291, nbisL1-mrna-23292, nbisL1-mrna-23294, nbisL1-mrna-23295, nbisL1-mrna-23296, nbisL1-mrna-23297, nbisL1-mrna-23356, nbisL1-mrna-6090
Rhizophoraceae	Rhizophora mangle	20	nbisL1-mrna-10689, nbisL1-mrna-10690, nbisL1-mrna-10691 ... nbisL1-mrna-10692, nbisL1-mrna-10693, nbisL1-mrna-10694, nbisL1-mrna-10696, nbisL1-mrna-10697, nbisL1-mrna-10698, nbisL1-mrna-10699, nbisL1-mrna-10701, nbisL1-mrna-10702, nbisL1-mrna-10703, nbisL1-mrna-10704, nbisL1-mrna-10705, nbisL1-mrna-10706, nbisL1-mrna-10707, nbisL1-mrna-24571, nbisL1-mrna-3838, nbisL1-mrna-4505
Salicaceae	Populus euphratica	9	populus_peu04374, populus_peu04375, populus_peu13603 ... populus_peu16092, populus_peu16093, populus_peu19595, populus_peu35200, populus_peu35201, populus_peu35202
Solanaceae	Lycium barbarum	24	gene-LOC132611686, gene-LOC132611687, gene-LOC132612773 ... gene-LOC132612779, gene-LOC132613840, gene-LOC132614318, gene-LOC132618888, gene-LOC132619545, gene-LOC132619665, gene-LOC132619666, gene-LOC132625986, gene-LOC132625992, gene-LOC132625993, gene-LOC132628394, gene-LOC132628516, gene-LOC132628578, gene-LOC132629254, gene-LOC132637486, gene-LOC132637977, gene-LOC132637978, gene-LOC132638781, gene-LOC132642654, gene-LOC132644123, gene-LOC132644135
Solanaceae	Solanum chilense	7	SOLCI001657100, SOLCI002294200, SOLCI003688600 ... SOLCI003690700, SOLCI003690800, SOLCI006455900, SOLCI006456000
Solanaceae	Solanum pennellii	8	gene-LOC107003257, gene-LOC107009535, gene-LOC107015501 ... gene-LOC107015502, gene-LOC107016425, gene-LOC107016445, gene-LOC107018129, gene-LOC114074873
Tamaricaceae	Reaumuria soongarica	1	gene_9059
Tamaricaceae	Tamarix chinensis	3	TC10G1014, TC10G1015, TC10G1018
Zosteraceae	Zostera marina	2	Zosma05g21290.v3.1, Zosma05g21300.v3.1