Basic Information
Locus ID:
nbisL1-mrna-23237
Species & Taxonomic ID:
Rhizophora mangle & 40031
Genome Assembly:
GCA_037832345.1
Description:
Anthocyanidin reductase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 002230F_pilon | 163019 | 165316 | - | nbisL1-mrna-23237 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.53 | 37,728.88 Da | 31.59 | 91.59 | -0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd08958 | FR_SDR_e | 12 | 322 | 7.80806E-148 | - |
| Pfam | PF01370 | NAD dependent epimerase/dehydratase family | 12 | 266 | 6.4E-24 | IPR001509 |
| SUPERFAMILY | SSF51735 | NAD(P)-binding Rossmann-fold domains | 5 | 339 | 2.06E-61 | IPR036291 |
| Gene3D | G3DSA:3.40.50.720 | - | 2 | 346 | 1.6E-138 | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G61720.1 | NAD(P)-binding Rossmann-fold superfamily protein. Negative regulator of flavonoid biosynthesis, mutants accumulate flavonoid pigments in their seed coat, putative oxidoreductase. It is thought that a ternary complex composed of TT2, TT8 and TTG1 is necessary for correct expression of BAN in seed endothelium. | 0 |
| RefSeq | XP_002305639.2 | anthocyanidin reductase ((2S)-flavan-3-ol-forming) [Populus trichocarpa] | 0 |
| D7U6G6 | Anthocyanidin reductase ((2S)-flavan-3-ol-forming) OS=Vitis vinifera OX=29760 GN=ANR PE=3 SV=1 | 0 | |
| TrEMBL | A0A2P2MX01 | Leucoanthocyanidin reductase family protein OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_22127 |
| Amaranthaceae | Atriplex hortensis | 1 | Ah017756 |
| Amaranthaceae | Salicornia bigelovii | 1 | Sbi_jg50255 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg1843 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00011419 |
| Amaranthaceae | Suaeda glauca | 2 | Sgl41640, Sgl46439 |
| Amaranthaceae | Chenopodium album | 3 | gene:ENSEOMG00000009716, gene:ENSEOMG00000034721 ... |
| Amaranthaceae | Chenopodium quinoa | 1 | CQ.Regalona.r1.8AG0003010 |
| Anacardiaceae | Pistacia vera | 3 | pistato.v30075310, pistato.v30293470, pistato.v30293480 |
| Apiaceae | Apium graveolens | 1 | Ag10G00741 |
| Arecaceae | Cocos nucifera | 3 | COCNU_04G008100, scaffold012456G000010 ... |
| Arecaceae | Phoenix dactylifera | 1 | gene-LOC103698208 |
| Asparagaceae | Asparagus officinalis | 2 | AsparagusV1_08.2625.V1.1, AsparagusV1_Unassigned.487.V1.1 |
| Brassicaceae | Arabidopsis thaliana | 1 | AT1G61720.1 |
| Brassicaceae | Eutrema salsugineum | 1 | Thhalv10023567m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 1 | Sp2g02830.v2.2 |
| Brassicaceae | Brassica nigra | 4 | BniB02g059260.2N, BniB07g002050.2N, BniB07g002080.2N ... |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq04G1534 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl04G1705 |
| Cymodoceaceae | Cymodocea nodosa | 2 | gene.Cymno13g00430, gene.Cymno17g06170 |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate05g29390 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG12.631 |
| Plumbaginaceae | Limonium bicolor | 2 | Lb4G22873, Lb4G25052 |
| Poaceae | Echinochloa crus-galli | 16 | AH09.2386, AH09.2387, AH09.2388, AH09.2389, AH09.2390 ... |
| Poaceae | Eleusine coracana subsp. coracana | 15 | gene-QOZ80_1AG0007110, gene-QOZ80_1BG0055850 ... |
| Poaceae | Hordeum vulgare | 7 | HORVU.MOREX.r3.2HG0199330.1, HORVU.MOREX.r3.2HG0199350.1 ... |
| Poaceae | Lolium multiflorum | 10 | gene-QYE76_001621, gene-QYE76_001700, gene-QYE76_041950 ... |
| Poaceae | Oryza coarctata | 5 | Oco07G016750, Oco07G016760, Oco08G016160, Oco19G006100 ... |
| Poaceae | Oryza sativa | 8 | LOC_Os04g53780.1, LOC_Os04g53800.1, LOC_Os04g53810.1 ... |
| Poaceae | Paspalum vaginatum | 9 | gene-BS78_06G240300, gene-BS78_06G240400 ... |
| Poaceae | Puccinellia tenuiflora | 8 | Pt_Chr0300953, Pt_Chr0300956, Pt_Chr0300957, Pt_Chr0300958 ... |
| Poaceae | Sporobolus alterniflorus | 5 | Chr23G005090, Chr25G002620, Chr25G002630, Chr26G016210 ... |
| Poaceae | Thinopyrum elongatum | 15 | Tel2E01G104200, Tel2E01G813500, Tel2E01G814800 ... |
| Poaceae | Triticum dicoccoides | 17 | gene_TRIDC2AG004580, gene_TRIDC2AG068050 ... |
| Poaceae | Triticum aestivum | 43 | TraesCS2A02G481200.1, TraesCS2A02G481300.1 ... |
| Poaceae | Zea mays | 4 | Zm00001eb276450_P001, Zm00001eb431500_P001 ... |
| Poaceae | Zoysia japonica | 6 | nbis-gene-22934, nbis-gene-22935, nbis-gene-22936 ... |
| Poaceae | Zoysia macrostachya | 6 | Zma_g20503, Zma_g20504, Zma_g20505, Zma_g22021, Zma_g22022 ... |
| Portulacaceae | Portulaca oleracea | 2 | evm.TU.LG18.777, evm.TU.LG20.1122 |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc10g01270 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_12_RagTag.958 |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-23887 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-9995 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-21666 |
| Rhizophoraceae | Kandelia candel | 1 | evm.TU.utg000027l.63 |
| Rhizophoraceae | Kandelia obovata | 1 | Maker00017419 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-10680 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-23237 |
| Salicaceae | Populus euphratica | 2 | populus_peu10197, populus_peu18344 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132617081 |
| Solanaceae | Solanum chilense | 1 | SOLCI006791800 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107012467 |
| Tamaricaceae | Reaumuria soongarica | 1 | STRG.26673_chr04_+ |
| Tamaricaceae | Tamarix chinensis | 1 | TC08G0331 |
| Zosteraceae | Zostera marina | 1 | Zosma06g27600.v3.1 |