Basic Information
Locus ID:
nbisL1-mrna-23061
Species & Taxonomic ID:
Carallia pectinifolia & 98586
Genome Assembly:
GCA_037832335.1
Description:
Belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr10 | 8043751 | 8045067 | - | nbisL1-mrna-23061 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.12 | 20,402.42 Da | 47.57 | 97.99 | -0.05 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 65 | 162 | 8.8E-7 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 69 | 169 | 3.77E-13 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 45 | 174 | 1.8E-19 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 165 | 8.895247 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G24030.6 | - | 0 |
| RefSeq | XP_012092052.1 | probable serine/threonine-protein kinase PBL28 [Jatropha curcas] | 0 |
| Q84M95 | Probable serine/threonine-protein kinase PBL28 OS=Arabidopsis thaliana OX=3702 GN=PBL28 PE=2 SV=1 | 0 | |
| TrEMBL | A0A067JEY0 | Protein kinase domain-containing protein OS=Jatropha curcas OX=180498 GN=JCGZ_21784 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 2 | jg34655, jg9440 |
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_18159 |
| Amaranthaceae | Beta vulgaris | 1 | BVRB_6g149410 |
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg42294, Sbi_jg44883 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg27246 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00002364 |
| Amaranthaceae | Suaeda glauca | 2 | Sgl40752, Sgl40783 |
| Amaranthaceae | Chenopodium album | 2 | gene:ENSEOMG00000003686, gene:ENSEOMG00000015929 |
| Amaranthaceae | Chenopodium quinoa | 1 | CQ.Regalona.r1.6BG0006320 |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30222850 |
| Apiaceae | Apium graveolens | 3 | Ag6G00344, Ag6G00345, Ag8G02204 |
| Arecaceae | Cocos nucifera | 1 | COCNU_01G009300 |
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_05.2381.V1.1 |
| Asteraceae | Flaveria trinervia | 1 | Ftri9G21464 |
| Brassicaceae | Arabidopsis thaliana | 1 | AT1G24030.1 |
| Brassicaceae | Eutrema salsugineum | 1 | Thhalv10008007m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 1 | Sp1g21360.v2.2 |
| Brassicaceae | Brassica nigra | 1 | BniB04g039300.2N |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq07G0823 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl07G0878 |
| Cymodoceaceae | Cymodocea nodosa | 1 | gene.Cymno06g10600 |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate03g25810 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG03.1103 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00020237 |
| Plumbaginaceae | Limonium bicolor | 1 | Lb1G01002 |
| Poaceae | Echinochloa crus-galli | 3 | AH03.1758, BH03.1914, CH03.2098 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_6AG0533870, gene-QOZ80_6BG0486930 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.5HG0477460.1 |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_004846 |
| Poaceae | Oryza coarctata | 1 | Oco18G003740 |
| Poaceae | Oryza sativa | 1 | LOC_Os09g20880.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_02G168900 |
| Poaceae | Puccinellia tenuiflora | 1 | Pt_Chr0702437 |
| Poaceae | Sporobolus alterniflorus | 4 | Chr10G011070, Chr11G011210, Chr11G011370, Chr14G013120 |
| Poaceae | Thinopyrum elongatum | 1 | Tel5E01G331700 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC5AG032020, gene_TRIDC5BG033670 |
| Poaceae | Triticum aestivum | 3 | TraesCS5A02G187300.1, TraesCS5B02G196600.1 ... |
| Poaceae | Zea mays | 1 | Zm00001eb098860_P001 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g32482 |
| Portulacaceae | Portulaca oleracea | 1 | evm.TU.LG13.254 |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc03g07130 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_17_RagTag.266 |
| Rhizophoraceae | Carallia pectinifolia | 2 | nbisL1-mrna-23061, nbisL1-mrna-23062 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-6288 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-14793 |
| Rhizophoraceae | Kandelia candel | 1 | evm.TU.utg000013l.185 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-7092 |
| Salicaceae | Populus euphratica | 2 | populus_peu07316, populus_peu21310 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132641396 |
| Solanaceae | Solanum chilense | 1 | SOLCI007241100 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107020696 |
| Tamaricaceae | Reaumuria soongarica | 1 | gene_2923 |
| Tamaricaceae | Tamarix chinensis | 1 | TC11G0955 |