Basic Information
Locus ID:
nbisL1-mrna-23052
Species & Taxonomic ID:
Rhizophora apiculata & 106626
Genome Assembly:
GCA_037832385.1
Description:
Glutaredoxin
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 6000436 | 6000987 | - | nbisL1-mrna-23052 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.46 | 21,083.45 Da | 57.73 | 54.37 | -0.87 |
Protein Domain:
KEGG Pathway
Pathway:
ko00010 (Glycolysis / Gluconeogenesis)
map00010 (Glycolysis / Gluconeogenesis)
ko00053 (Ascorbate and aldarate metabolism)
map00053 (Ascorbate and aldarate metabolism)
ko00071 (Fatty acid degradation)
map00071 (Fatty acid degradation)
ko00280 (Valine, leucine and isoleucine degradation)
map00280 (Valine, leucine and isoleucine degradation)
ko00310 (Lysine degradation)
map00310 (Lysine degradation)
ko00330 (Arginine and proline metabolism)
map00330 (Arginine and proline metabolism)
ko00340 (Histidine metabolism)
map00340 (Histidine metabolism)
ko00380 (Tryptophan metabolism)
map00380 (Tryptophan metabolism)
ko00410 (beta-Alanine metabolism)
map00410 (beta-Alanine metabolism)
ko00561 (Glycerolipid metabolism)
map00561 (Glycerolipid metabolism)
ko00620 (Pyruvate metabolism)
map00620 (Pyruvate metabolism)
ko00625 (Chloroalkane and chloroalkene degradation)
map00625 (Chloroalkane and chloroalkene degradation)
ko00903 (Limonene degradation)
map00903 (Limonene degradation)
ko00981 (Insect hormone biosynthesis)
map00981 (Insect hormone biosynthesis)
ko01100 (Metabolic pathways)
map01100 (Metabolic pathways)
ko01110 (Biosynthesis of secondary metabolites)
map01110 (Biosynthesis of secondary metabolites)
ko01120 (Microbial metabolism in diverse environments)
map01120 (Microbial metabolism in diverse environments)
Reaction:
R00264 (2,5-Dioxopentanoate + NADP+ + H2O <=> 2-Oxoglutarate + NADPH + H+)
R00631 (Aldehyde + NAD+ + H2O <=> Fatty acid + NADH + H+)
R00710 (Acetaldehyde + NAD+ + H2O <=> Acetate + NADH + H+)
R00904 (3-Aminopropanal + NAD+ + H2O <=> beta-Alanine + NADH + H+)
R01752 (D-Glyceraldehyde + NAD+ + H2O <=> D-Glycerate + NADH + H+)
R01986 (4-Aminobutyraldehyde + NADP+ + H2O <=> 4-Aminobutanoate + NADPH + H+)
R02549 (4-Aminobutyraldehyde + NAD+ + H2O <=> 4-Aminobutanoate + NADH + H+)
R02678 (Indole-3-acetaldehyde + NAD+ + H2O <=> Indole-3-acetate + NADH + H+)
R02940 (2-Propynal + NAD+ + H2O <=> Propynoate + NADH + H+)
R02957 (D-Glucuronolactone + NAD+ + 2 H2O <=> D-Glucarate + NADH + H+)
R03283 (4-Trimethylammoniobutanal + NAD+ + H2O <=> 4-Trimethylammoniobutanoate + NADH + H+)
R03869 ((S)-Methylmalonate semialdehyde + NAD+ + H2O <=> Methylmalonate + NADH + H+)
R04065 (Imidazole-4-acetaldehyde + NAD+ + H2O <=> Imidazole-4-acetate + NADH + H+)
R04506 (3alpha,7alpha-Dihydroxy-5beta-cholestan-26-al + NAD+ + H2O <=> 3alpha,7alpha-Dihydroxy-5beta-cholestanate + NADH + H+)
R04903 (5-Hydroxyindoleacetaldehyde + NAD+ + H2O <=> 5-Hydroxyindoleacetate + H+ + NADH)
R05050 (N4-Acetylaminobutanal + NAD+ + H2O <=> 4-Acetamidobutanoate + NADH + H+)
R05237 (trans-3-Chloroallyl aldehyde + H2O <=> trans-3-Chloroacrylic acid + 2 H+)
R05238 (cis-3-Chloroallyl aldehyde + H2O <=> cis-3-Chloroacrylic acid + 2 H+)
R05286 (Chloroacetaldehyde + NAD+ + H2O <=> Chloroacetic acid + NADH + H+)
R06366 (Perillyl aldehyde + H2O + NAD+ <=> Perillic acid + NADH + H+)
R08146 (2-trans,6-trans-Farnesal + NAD+ + H2O <=> Farnesoic acid + NADH + H+)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G17280.1 | 0 | |
| RefSeq | XP_021908113.1 | uncharacterized protein LOC110822332 [Carica papaya] | 0 |
| TrEMBL | A0A2P2N0L9 | Oxidoreductase-like domain-containing protein OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 1 | jg31187 |
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_8749 |
| Amaranthaceae | Atriplex hortensis | 1 | Ah027669 |
| Amaranthaceae | Beta vulgaris | 1 | BVRB_6g129690 |
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg14121, Sbi_jg51872 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg10024 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00025398 |
| Amaranthaceae | Suaeda glauca | 2 | Sgl34911, Sgl49608 |
| Amaranthaceae | Chenopodium album | 1 | gene:ENSEOMG00000027911 |
| Amaranthaceae | Chenopodium quinoa | 2 | CQ.Regalona.r1.6AG0027450, CQ.Regalona.r1.6BG0028830 |
| Apiaceae | Apium graveolens | 1 | Ag9G00670 |
| Arecaceae | Cocos nucifera | 1 | COCNU_09G000550 |
| Asteraceae | Flaveria trinervia | 2 | Ftri18G12603, Ftri1G01664 |
| Brassicaceae | Arabidopsis thaliana | 1 | AT5G17280.1 |
| Brassicaceae | Eutrema salsugineum | 1 | Thhalv10014934m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 1 | Sp6g26950.v2.2 |
| Brassicaceae | Brassica nigra | 2 | BniB02g045650.2N, BniB05g022100.2N |
| Cymodoceaceae | Cymodocea nodosa | 1 | gene.Cymno14g08450 |
| Dunaliellaceae | Dunaliella salina | 1 | Dusal.0304s00013.v1.0 |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate02g11190 |
| Malvaceae | Hibiscus hamabo Siebold & Zucc. | 1 | nbisL1-mrna-6997 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00020839 |
| Poaceae | Echinochloa crus-galli | 2 | AH03.2704, CH03.3052 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_6AG0528500, gene-QOZ80_6BG0482520 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.5HG0498540.1.CDS1 |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_006801 |
| Poaceae | Oryza sativa | 1 | LOC_Os09g36120.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_02G252000 |
| Poaceae | Puccinellia tenuiflora | 1 | Pt_Chr0700982 |
| Poaceae | Sporobolus alterniflorus | 3 | Chr10G013990, Chr11G008310, Chr21G010550 |
| Poaceae | Thinopyrum elongatum | 1 | Tel5E01G507400 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC5AG047160, gene_TRIDC5BG051000 |
| Poaceae | Triticum aestivum | 3 | TraesCS5A02G318900.1.cds1, TraesCS5B02G319400.1.cds1 ... |
| Poaceae | Zea mays | 1 | Zm00001eb319510_P001 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-35304 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g32218 |
| Portulacaceae | Portulaca oleracea | 1 | evm.TU.LG25.929 |
| Posidoniaceae | Posidonia oceanica | 2 | gene.Posoc06g13240, gene.Posoc08g14440 |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-17051 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-14489 |
| Rhizophoraceae | Ceriops zippeliana | 4 | nbisL1-mrna-11735, nbisL1-mrna-21069, nbisL1-mrna-22577 ... |
| Rhizophoraceae | Kandelia candel | 1 | add.evm.TU.utg000011l.528 |
| Rhizophoraceae | Kandelia obovata | 1 | Maker00007438 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-23052 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-3035 |
| Salicaceae | Populus euphratica | 1 | populus_peu23651 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132624826 |
| Solanaceae | Solanum chilense | 1 | SOLCI002378800 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107009166 |
| Tamaricaceae | Tamarix chinensis | 1 | TC09G0091 |
| Zosteraceae | Zostera marina | 1 | Zosma01g31150.v3.1 |