Basic Information
Locus ID:
nbisL1-mrna-23033
Species & Taxonomic ID:
Rhizophora mangle & 40031
Genome Assembly:
GCA_037832345.1
Description:
U-box domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 002120F_pilon | 574116 | 578530 | - | nbisL1-mrna-23033 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.28 | 86,176.39 Da | 50.75 | 81.57 | -0.43 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01989 | STK_N | 16 | 174 | 2.93686E-54 | - |
| Pfam | PF00069 | Protein kinase domain | 475 | 728 | 5.4E-42 | IPR000719 |
| Pfam | PF00582 | Universal stress protein family | 17 | 146 | 1.1E-6 | IPR006016 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 456 | 733 | 5.53E-70 | IPR011009 |
| SUPERFAMILY | SSF52402 | Adenine nucleotide alpha hydrolases-like | 18 | 150 | 1.76E-5 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 547 | 752 | 2.8E-50 | - |
| Gene3D | G3DSA:3.40.50.620 | HUPs | 4 | 172 | 1.6E-8 | IPR014729 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 451 | 546 | 2.5E-25 | - |
| SMART | SM00220 | serkin_6 | 474 | 737 | 2.2E-29 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 474 | 741 | 36.640289 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 592 | 604 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 200 | 219 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 200 | 242 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 751 | 772 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 221 | 242 | - | - |
| Coils | Coil | Coil | 400 | 452 | - | - |
| Coils | Coil | Coil | 366 | 386 | - | - |
| Coils | Coil | Coil | 340 | 360 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G24370.1 | Protein kinase protein with adenine nucleotide alpha hydrolases-like domain. | 0 |
| RefSeq | XP_038696897.1 | U-box domain-containing protein 35-like [Tripterygium wilfordii] | 0 |
| Q9FKG6 | U-box domain-containing protein 52 OS=Arabidopsis thaliana OX=3702 GN=PUB52 PE=2 SV=1 | 0 | |
| TrEMBL | A0A6J0ZPW6 | U-box domain-containing protein 35 OS=Herrania umbratica OX=108875 GN=LOC110411043 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology