Basic Information
Locus ID:
nbisL1-mrna-22992
Species & Taxonomic ID:
Rhizophora apiculata & 106626
Genome Assembly:
GCA_037832385.1
Description:
receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 4589367 | 4590554 | + | nbisL1-mrna-22992 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.83 | 44,018.23 Da | 33.34 | 80.71 | -0.17 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF12819 | Malectin-like domain | 31 | 388 | 6.7E-25 | IPR024788 |
| Gene3D | G3DSA:2.60.120.430 | - | 27 | 179 | 4.2E-25 | - |
| Gene3D | G3DSA:2.60.120.430 | - | 229 | 385 | 1.4E-14 | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G00300.1 | fringe-related protein. | 0 |
| RefSeq | XP_034910319.1 | probable receptor-like protein kinase At5g24010 [Populus alba] | 0 |
| Q9FLW0 | Probable receptor-like protein kinase At5g24010 OS=Arabidopsis thaliana OX=3702 GN=At5g24010 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2P2MWG2 | Pto-like kinase OGw family protein OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 6 | jg30686, jg30687, jg30689, jg30691, jg30692, jg39988 |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30205610 |
| Asteraceae | Flaveria trinervia | 1 | Ftri18G02862 |
| Brassicaceae | Eutrema salsugineum | 1 | Thhalv10000544m.g.v1.0 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-22992 |