Basic Information
Locus ID:
nbisL1-mrna-22792
Species & Taxonomic ID:
Carallia pectinifolia & 98586
Genome Assembly:
GCA_037832335.1
Description:
Belongs to the UDP-glycosyltransferase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr10 | 5475402 | 5476910 | - | nbisL1-mrna-22792 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.92 | 55,680.39 Da | 39.49 | 83.57 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd03784 | GT1_Gtf-like | 7 | 471 | 6.36147E-66 | IPR002213 |
| Pfam | PF00201 | UDP-glucoronosyl and UDP-glucosyl transferase | 255 | 442 | 7.4E-19 | IPR002213 |
| SUPERFAMILY | SSF53756 | UDP-Glycosyltransferase/glycogen phosphorylase | 8 | 484 | 6.73E-100 | - |
| Gene3D | G3DSA:3.40.50.2000 | Glycogen Phosphorylase B; | 276 | 467 | 2.1E-62 | - |
| Gene3D | G3DSA:3.40.50.2000 | Glycogen Phosphorylase B; | 2 | 270 | 5.7E-54 | - |
| ProSitePatterns | PS00375 | UDP-glycosyltransferases signature. | 361 | 404 | - | IPR035595 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G12890.1 | UDP-Glycosyltransferase superfamily protein. | 0 |
| RefSeq | XP_002297794.2 | UDP-glycosyltransferase 92A1 [Populus trichocarpa] | 0 |
| Q9LXV0 | UDP-glycosyltransferase 92A1 OS=Arabidopsis thaliana OX=3702 GN=UGT92A1 PE=2 SV=1 | 0 | |
| TrEMBL | B9GM96 | Glycosyltransferase OS=Populus trichocarpa OX=3694 GN=POPTR_001G016300 PE=3 SV=2 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology