Basic Information
Locus ID:
nbisL1-mrna-22721
Species & Taxonomic ID:
Rhizophora apiculata & 106626
Genome Assembly:
GCA_037832385.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 12260333 | 12263494 | + | nbisL1-mrna-22721 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.08 | 102,216.16 Da | 32.26 | 101.01 | -0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 32 | 68 | 2.1E-6 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 691 | 780 | 4.8E-14 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 144 | 202 | 1.2E-6 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 573 | 594 | 1.1 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 288 | 310 | 0.57 | IPR001611 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 685 | 887 | 4.65E-33 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 228 | 594 | 6.8E-58 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 37 | 286 | 3.4E-52 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 183 | 285 | 4.2E-25 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 767 | 893 | 5.8E-21 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 286 | 383 | 9.5E-24 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 494 | 616 | 3.9E-29 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 672 | 766 | 5.7E-22 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 30 | 182 | 1.0E-41 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 384 | 493 | 9.4E-24 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 166 | 190 | 280.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 500 | 524 | 140.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 239 | 263 | 20.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 571 | 595 | 42.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 548 | 570 | 140.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 118 | 142 | 87.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 310 | 334 | 280.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 689 | 918 | 12.65489 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 695 | 718 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G25930.1 | Protein kinase family protein with leucine-rich repeat domain. | 0 |
| RefSeq | XP_011008121.1 | PREDICTED: receptor-like protein kinase 5 [Populus euphratica] | 0 |
| C0LGX3 | LRR receptor-like serine/threonine-protein kinase HSL2 OS=Arabidopsis thaliana OX=3702 GN=HSL2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2P2KLD6 | Receptor-like protein kinase 5 OS=Rhizophora mucronata OX=61149 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology