Basic Information
Locus ID:
nbisL1-mrna-2270
Species & Taxonomic ID:
Hibiscus hamabo Siebold & Zucc. & 1841
Description:
(NAC) domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 19247128 | 19249819 | + | nbisL1-mrna-2270 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.45 | 43,887.40 Da | 47.74 | 65.74 | -0.76 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02365 | No apical meristem (NAM) protein | 56 | 197 | 6.4E-22 | IPR003441 |
| SUPERFAMILY | SSF101941 | NAC domain | 40 | 216 | 6.28E-33 | IPR036093 |
| Gene3D | G3DSA:2.170.150.80 | NAC domain | 64 | 221 | 4.9E-27 | IPR036093 |
| ProSiteProfiles | PS51005 | NAC domain profile. | 55 | 216 | 27.302425 | IPR003441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G01600.1 | NAC domain containing protein 44. | 0 |
| RefSeq | XP_038998446.1 | SUPPRESSOR OF GAMMA RESPONSE 1-like [Hibiscus syriacus] | 0 |
| Q6NQK2 | SUPPRESSOR OF GAMMA RESPONSE 1 OS=Arabidopsis thaliana OX=3702 GN=SOG1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5D2NY85 | NAC domain-containing protein OS=Gossypium tomentosum OX=34277 GN=ES332_A09G037800v1 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology