Basic Information
Locus ID:
nbisL1-mrna-2268
Species & Taxonomic ID:
Rhizophora apiculata & 106626
Genome Assembly:
GCA_037832385.1
Description:
BEST Arabidopsis thaliana protein match is
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 779684 | 785004 | + | nbisL1-mrna-2268 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.63 | 88,116.78 Da | 45.21 | 63.88 | -0.95 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd04508 | TUDOR | 536 | 582 | 0.00554688 | IPR002999 |
| SUPERFAMILY | SSF63748 | Tudor/PWWP/MBT | 533 | 575 | 3.99E-8 | - |
| Gene3D | G3DSA:2.30.30.140 | - | 523 | 582 | 1.4E-11 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 373 | 533 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 500 | 533 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 728 | 763 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 678 | 698 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 211 | 345 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 222 | 240 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 383 | 434 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 587 | 809 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 609 | 630 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 297 | 312 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 256 | 279 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 330 | 345 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 476 | 499 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 457 | 474 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 764 | 809 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 701 | 727 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 435 | 456 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 647 | 677 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 631 | 645 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G31880.2 | 0 | |
| RefSeq | XP_021596484.1 | titin homolog isoform X1 [Manihot esculenta] | 0 |
| Q8GUP3 | Sister chromatid cohesion protein PDS5 homolog C OS=Arabidopsis thaliana OX=3702 GN=PDS5C PE=1 SV=1 | 0 | |
| TrEMBL | A0A2P2LRH0 | Tudor domain-containing protein OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology