Basic Information
Locus ID:
nbisL1-mrna-22667
Species & Taxonomic ID:
Rhizophora mangle & 40031
Genome Assembly:
GCA_037832345.1
Description:
Sodium hydrogen exchanger
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 002189F_pilon | 21136 | 24945 | + | nbisL1-mrna-22667 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.13 | 58,642.38 Da | 35.73 | 117.93 | 0.55 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00999 | Sodium/hydrogen exchanger family | 25 | 440 | 5.7E-56 | IPR006153 |
| Gene3D | G3DSA:1.20.1530.20 | - | 17 | 445 | 9.0E-15 | IPR038770 |
| TIGRFAM | TIGR00840 | b_cpa1: sodium/hydrogen exchanger 3 | 15 | 452 | 1.7E-78 | IPR004709 |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 95 | 109 | 1.7E-10 | IPR004709 |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 81 | 92 | 1.7E-10 | IPR004709 |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 150 | 160 | 1.7E-10 | IPR004709 |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 110 | 118 | 1.7E-10 | IPR004709 |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G55470.1 | Na+/H+ (sodium hydrogen) exchanger 3. member of Sodium proton exchanger family | 0 |
| RefSeq | XP_022717895.1 | sodium/hydrogen exchanger 4 isoform X2 [Durio zibethinus] | 0 |
| Q8S397 | Sodium/hydrogen exchanger 4 OS=Arabidopsis thaliana OX=3702 GN=NHX4 PE=2 SV=2 | 0 | |
| TrEMBL | A0A6P5WP41 | Sodium/hydrogen exchanger OS=Durio zibethinus OX=66656 GN=LOC111276429 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology