Basic Information
Locus ID:
nbisL1-mrna-22597
Species & Taxonomic ID:
Rhizophora apiculata & 106626
Genome Assembly:
GCA_037832385.1
Description:
Belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 9690478 | 9693764 | + | nbisL1-mrna-22597 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.92 | 35,323.71 Da | 30.75 | 81.03 | -0.27 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 58 | 275 | 5.4E-21 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 59 | 277 | 2.74E-38 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 57 | 296 | 5.8E-45 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 282 | 19.976301 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G13160.1 | Protein kinase superfamily protein. Mutant is defective in perception of Pseudomonas syringae avirulence gene avrPphB. Encodes a putative serine-threonine kinase. | 0 |
| RefSeq | XP_002512892.1 | probable serine/threonine-protein kinase PBL7 isoform X2 [Ricinus communis] | 0 |
| Q9FE20 | Serine/threonine-protein kinase PBS1 OS=Arabidopsis thaliana OX=3702 GN=PBS1 PE=1 SV=1 | 0 | |
| TrEMBL | B9RH33 | Receptor serine-threonine protein kinase, putative OS=Ricinus communis OX=3988 GN=RCOM_1446790 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-2522 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-1716 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-22597 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-1609 |