Basic Information
Locus ID:
nbisL1-mrna-22569
Species & Taxonomic ID:
Rhizophora mangle & 40031
Genome Assembly:
GCA_037832345.1
Description:
heat shock protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 000487F_pilon | 239632 | 242952 | + | nbisL1-mrna-22569 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.95 | 81,914.87 Da | 39.25 | 82.11 | -0.64 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16927 | HATPase_Hsp90-like | 19 | 207 | 2.66707E-110 | - |
| Pfam | PF00183 | Hsp90 protein | 189 | 698 | 3.4E-233 | IPR001404 |
| Pfam | PF02518 | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase | 32 | 186 | 1.7E-15 | IPR003594 |
| SUPERFAMILY | SSF54211 | Ribosomal protein S5 domain 2-like | 280 | 535 | 5.39E-108 | IPR020568 |
| SUPERFAMILY | SSF110942 | HSP90 C-terminal domain | 559 | 680 | 5.23E-39 | IPR037196 |
| SUPERFAMILY | SSF55874 | ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | 9 | 218 | 5.16E-75 | IPR036890 |
| Gene3D | G3DSA:1.20.120.790 | - | 535 | 684 | 7.0E-67 | IPR037196 |
| Gene3D | G3DSA:3.30.230.80 | - | 279 | 447 | 5.6E-85 | - |
| Gene3D | G3DSA:3.40.50.11260 | - | 448 | 534 | 1.2E-40 | - |
| Gene3D | G3DSA:3.30.565.10 | - | 7 | 234 | 4.7E-97 | IPR036890 |
| SMART | SM00387 | HKATPase_4 | 32 | 187 | 1.1E-8 | IPR003594 |
| PIRSF | PIRSF002583 | HSP90_HTPG | 3 | 716 | 7.3E-257 | IPR001404 |
| ProSitePatterns | PS00298 | Heat shock hsp90 proteins family signature. | 30 | 39 | - | IPR019805 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 175 | 192 | 6.2E-83 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 123 | 145 | 6.2E-83 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 80 | 97 | 6.2E-83 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 31 | 53 | 6.2E-83 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 10 | 30 | 6.2E-83 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 98 | 115 | 6.2E-83 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 193 | 211 | 6.2E-83 | IPR020575 |
| Hamap | MF_00505 | Chaperone protein HtpG [htpG]. | 7 | 681 | 27.210999 | IPR001404 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 222 | 236 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 220 | 265 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 689 | 716 | - | - |
| Coils | Coil | Coil | 539 | 559 | - | - |
| Coils | Coil | Coil | 224 | 274 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
KO Term:
Pathway:
ko04141 (Protein processing in endoplasmic reticulum)
map04141 (Protein processing in endoplasmic reticulum)
ko04151 (PI3K-Akt signaling pathway)
map04151 (PI3K-Akt signaling pathway)
map04217 (Necroptosis)
ko04612 (Antigen processing and presentation)
map04612 (Antigen processing and presentation)
map04621 (NOD-like receptor signaling pathway)
ko04626 (Plant-pathogen interaction)
map04626 (Plant-pathogen interaction)
map04657 (IL-17 signaling pathway)
map04659 (Th17 cell differentiation)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G56030.1 | heat shock protein 81-2. A member of heat shock protein 90 (HSP90) gene family. Expressed in all tissues and abundant in root apical meristem, pollen and tapetum. Expression is NOT heat-induced but induced by IAA and NaCl. Interacts with HsfA1d in the cytosol and the nucleus and negatively regulates HsfA1d. Did not bind to AtHsfA4c. | 0 |
| RefSeq | XP_016165901.1 | heat shock cognate protein 80 [Arachis ipaensis] | 0 |
| P36181 | Heat shock cognate protein 80 OS=Solanum lycopersicum OX=4081 GN=HSC80 PE=2 SV=1 | 0 | |
| TrEMBL | A0A444YFL6 | HATPase_c domain-containing protein OS=Arachis hypogaea OX=3818 GN=Ahy_B07g088850 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology