Basic Information
Locus ID:
nbisL1-mrna-22554
Species & Taxonomic ID:
Rhizophora mangle & 40031
Genome Assembly:
GCA_037832345.1
Short Name:
CAX5
Description:
Belongs to the Ca(2 ) cation antiporter (CaCA) (TC 2.A.19) family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 000487F_pilon | 138806 | 143112 | - | nbisL1-mrna-22554 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.06 | 49,896.62 Da | 32.00 | 105.03 | 0.43 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01699 | Sodium/calcium exchanger protein | 296 | 435 | 4.3E-21 | IPR004837 |
| Pfam | PF01699 | Sodium/calcium exchanger protein | 104 | 259 | 1.0E-22 | IPR004837 |
| Gene3D | G3DSA:1.20.1420.30 | - | 133 | 270 | 1.2E-15 | IPR044880 |
| Gene3D | G3DSA:1.20.1420.30 | - | 279 | 439 | 1.3E-20 | IPR044880 |
| TIGRFAM | TIGR00378 | cax: calcium/proton exchanger | 86 | 438 | 2.2E-102 | IPR004798 |
| TIGRFAM | TIGR00846 | caca2: calcium/proton exchanger | 72 | 438 | 3.8E-116 | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G55730.1 | cation exchanger 5. member of Low affinity calcium antiporter CAX2 family | 0 |
| RefSeq | XP_021645986.1 | vacuolar cation/proton exchanger 5-like isoform X1 [Hevea brasiliensis] | 0 |
| Q8L783 | Vacuolar cation/proton exchanger 5 OS=Arabidopsis thaliana OX=3702 GN=CAX5 PE=2 SV=1 | 0 | |
| TrEMBL | A0A2P2L0Q4 | Vacuolar cation/proton exchanger OS=Rhizophora mucronata OX=61149 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology