Basic Information
Locus ID:
nbisL1-mrna-22517
Species & Taxonomic ID:
Carallia pectinifolia & 98586
Genome Assembly:
GCA_037832335.1
Description:
Leucine-rich repeat receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr10 | 2626999 | 2630582 | - | nbisL1-mrna-22517 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.96 | 74,086.61 Da | 36.23 | 96.23 | -0.05 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd12087 | TM_EGFR-like | 301 | 340 | 0.00143088 | - |
| CDD | cd14066 | STKc_IRAK | 415 | 675 | 6.45629E-90 | - |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 25 | 65 | 1.3E-9 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 141 | 200 | 3.8E-8 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 413 | 674 | 8.8E-41 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 389 | 674 | 9.53E-60 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 26 | 235 | 7.94E-43 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 488 | 681 | 2.8E-45 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 174 | 248 | 6.3E-17 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 383 | 487 | 4.4E-25 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 24 | 173 | 8.4E-42 | IPR032675 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 409 | 681 | 31.862995 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G22730.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_021691505.1 | LRR receptor-like serine/threonine-protein kinase GSO2 isoform X1 [Hevea brasiliensis] | 0 |
| C0LGU5 | Probable LRR receptor-like serine/threonine-protein kinase At5g45780 OS=Arabidopsis thaliana OX=3702 GN=At5g45780 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2P2J7X7 | Uncharacterized protein MANES_01G073800 OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology