Basic Information
Locus ID:
nbisL1-mrna-2250
Species & Taxonomic ID:
Rhizophora mangle & 40031
Genome Assembly:
GCA_037832345.1
Description:
CDPK-related kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 001711F_pilon | 4744024 | 4750454 | - | nbisL1-mrna-2250 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.87 | 69,893.56 Da | 47.33 | 78.04 | -0.42 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05117 | STKc_CAMK | 173 | 435 | 6.91228E-133 | - |
| Pfam | PF00069 | Protein kinase domain | 174 | 436 | 5.6E-71 | IPR000719 |
| SUPERFAMILY | SSF47473 | EF-hand | 464 | 618 | 2.32E-17 | IPR011992 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 171 | 463 | 3.64E-84 | IPR011009 |
| Gene3D | G3DSA:1.10.238.10 | - | 461 | 615 | 1.7E-19 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 454 | 545 | 1.7E-19 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 263 | 447 | 1.6E-60 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 167 | 262 | 1.4E-22 | - |
| SMART | SM00220 | serkin_6 | 174 | 436 | 2.0E-100 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 478 | 513 | 9.101698 | IPR002048 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 174 | 436 | 51.480988 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 298 | 310 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 180 | 206 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 33 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 94 | 114 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 57 | 71 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 71 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 97 | 111 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G50530.1 | CDPK-related kinase. CDPK-related kinase | 0 |
| RefSeq | XP_012079194.1 | CDPK-related kinase 5 [Jatropha curcas] | 0 |
| Q9SCS2 | CDPK-related kinase 5 OS=Arabidopsis thaliana OX=3702 GN=CRK5 PE=2 SV=1 | 0 | |
| TrEMBL | A0A2P2L933 | Protein kinase domain-containing protein OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology