Basic Information
Locus ID:
nbisL1-mrna-22462
Species & Taxonomic ID:
Rhizophora apiculata & 106626
Genome Assembly:
GCA_037832385.1
Description:
Translocase of chloroplast
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 6507625 | 6511041 | + | nbisL1-mrna-22462 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.12 | 124,710.00 Da | 43.40 | 80.27 | -0.55 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01853 | Toc34_like | 482 | 724 | 2.20634E-133 | - |
| Pfam | PF04548 | AIG1 family | 507 | 640 | 3.1E-29 | IPR006703 |
| Pfam | PF11886 | Translocase of chloroplast 159/132, membrane anchor domain | 865 | 1129 | 2.0E-123 | IPR024283 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 500 | 641 | 1.11E-17 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 480 | 724 | 4.1E-56 | IPR027417 |
| TIGRFAM | TIGR00993 | 3a0901s04IAP86: chloroplast protein import component Toc86/159, G and M domains | 383 | 1130 | 0.0 | IPR005690 |
| ProSiteProfiles | PS51720 | AIG1-type G domain profile. | 504 | 734 | 31.938622 | IPR006703 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 20 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 50 | 64 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 403 | 422 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 397 | 427 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 49 | 70 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 360 | 383 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 113 | 176 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 338 | 358 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 761 | 791 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 338 | 385 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 113 | 151 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 765 | 786 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G16640.1 | multimeric translocon complex in the outer envelope membrane 132. | 0 |
| RefSeq | XP_021650247.1 | translocase of chloroplast 120, chloroplastic-like [Hevea brasiliensis] | 0 |
| Q9SLF3 | Translocase of chloroplast 132, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TOC132 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2P2LUC2 | Protein translocase OS=Rhizophora mucronata OX=61149 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology